ENSMUSG00000031119


Mus musculus

Features
Gene ID: ENSMUSG00000031119
  
Biological name :Gpc4
  
Synonyms : glypican 4 / Gpc4 / P51655
  
Possible biological names infered from orthology : O75487
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A5
Gene start: 52053021
Gene end: 52165252
  
Corresponding Affymetrix probe sets: 10604564 (MoGene1.0st)   1421088_at (Mouse Genome 430 2.0 Array)   1436514_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000033450
NCBI entrez gene - 14735     See in Manteia.
MGI - MGI:104902
RefSeq - NM_008150
RefSeq - XM_011250978
RefSeq Peptide - NP_032176
swissprot - P51655
Ensembl - ENSMUSG00000031119
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpc4ENSDARG00000015472Danio rerio
 GPC4ENSGALG00000006080Gallus gallus
 GPC4ENSG00000076716Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gpc6 / Q9R087 / glypican 6 / Q9Y625*ENSMUSG0000005857164
Gpc1 / Q9QZF2 / glypican 1 / P35052*ENSMUSG0000003422043
Gpc2 / Q8BKV1 / glypican 2 (cerebroglycan) / Q8N158* / glypican 2*ENSMUSG0000002951038
Gpc5 / Q8CAL5 / glypican 5 / P78333*ENSMUSG0000002211224
Gpc3 / Q8CFZ4 / glypican 3 / P51654*ENSMUSG0000005565322
Gm43720 / GPC2* / Q8N158* / glypican 2*ENSMUSG0000010624719


Protein motifs (from Interpro)
Interpro ID Name
 IPR001863  Glypican
 IPR019803  Glypican, conserved site
 IPR031180  Glypican-4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009966 regulation of signal transduction IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005796 Golgi lumen TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0046658 anchored component of plasma membrane IEA
 molecular_functionGO:0043395 heparan sulfate proteoglycan binding IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis
HS-GAG biosynthesis
HS-GAG degradation
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001577 anemia "less than normal levels of red blood cells, hemoglobin or volume of packed red blood cells " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:53370]
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Allelic Composition: Oca2p-88H/Oca2p
Genetic Background: involves: 101/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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