ENSMUSG00000055653


Mus musculus

Features
Gene ID: ENSMUSG00000055653
  
Biological name :Gpc3
  
Synonyms : glypican 3 / Gpc3 / Q8CFZ4
  
Possible biological names infered from orthology : P51654
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A5
Gene start: 52272426
Gene end: 52613950
  
Corresponding Affymetrix probe sets: 10604576 (MoGene1.0st)   1450990_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000110507
Ensembl peptide - ENSMUSP00000064131
NCBI entrez gene - 14734     See in Manteia.
MGI - MGI:104903
RefSeq - NM_016697
RefSeq Peptide - NP_057906
swissprot - B1ATR5
swissprot - Q3TWB2
swissprot - Q8CFZ4
Ensembl - ENSMUSG00000055653
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpc3ENSDARG00000032199Danio rerio
 GPC3ENSGALG00000006087Gallus gallus
 GPC3ENSG00000147257Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gpc5 / Q8CAL5 / glypican 5 / P78333*ENSMUSG0000002211241
Gpc6 / Q9R087 / glypican 6 / Q9Y625*ENSMUSG0000005857122
Gpc4 / P51655 / glypican 4 / O75487*ENSMUSG0000003111921
Gpc1 / Q9QZF2 / glypican 1 / P35052*ENSMUSG0000003422021
Gpc2 / Q8BKV1 / glypican 2 (cerebroglycan) / Q8N158* / glypican 2*ENSMUSG0000002951020
Gm43720 / GPC2* / Q8N158* / glypican 2*ENSMUSG0000010624710


Protein motifs (from Interpro)
Interpro ID Name
 IPR001863  Glypican
 IPR015501  Glypican-3
 IPR019803  Glypican, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IGI
 biological_processGO:0001822 kidney development IMP
 biological_processGO:0008285 negative regulation of cell proliferation IGI
 biological_processGO:0009887 animal organ morphogenesis IMP
 biological_processGO:0009948 anterior/posterior axis specification IGI
 biological_processGO:0009966 regulation of signal transduction IEA
 biological_processGO:0010171 body morphogenesis IMP
 biological_processGO:0010466 negative regulation of peptidase activity IEA
 biological_processGO:0030282 bone mineralization IMP
 biological_processGO:0030316 osteoclast differentiation IMP
 biological_processGO:0030324 lung development IMP
 biological_processGO:0030513 positive regulation of BMP signaling pathway IMP
 biological_processGO:0035116 embryonic hindlimb morphogenesis IGI
 biological_processGO:0040008 regulation of growth IMP
 biological_processGO:0045732 positive regulation of protein catabolic process IDA
 biological_processGO:0045807 positive regulation of endocytosis IDA
 biological_processGO:0045879 negative regulation of smoothened signaling pathway IMP
 biological_processGO:0045880 positive regulation of smoothened signaling pathway IMP
 biological_processGO:0045926 negative regulation of growth IMP
 biological_processGO:0046326 positive regulation of glucose import IDA
 biological_processGO:0050680 negative regulation of epithelial cell proliferation IMP
 biological_processGO:0060976 coronary vasculature development IMP
 biological_processGO:0072111 cell proliferation involved in kidney development IMP
 biological_processGO:0072138 mesenchymal cell proliferation involved in ureteric bud development IMP
 biological_processGO:0072180 mesonephric duct morphogenesis IMP
 biological_processGO:0072203 cell proliferation involved in metanephros development IMP
 biological_processGO:0090090 negative regulation of canonical Wnt signaling pathway ISO
 biological_processGO:2000096 positive regulation of Wnt signaling pathway, planar cell polarity pathway ISO
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005764 lysosome IDA
 cellular_componentGO:0005796 Golgi lumen TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0046658 anchored component of plasma membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030414 peptidase inhibitor activity IEA
 molecular_functionGO:0043395 heparan sulfate proteoglycan binding IEA
 molecular_functionGO:0060422 peptidyl-dipeptidase inhibitor activity ISO


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis
HS-GAG biosynthesis
HS-GAG degradation
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000087 absent mandible "missing the lower bony framework of the mouth where the inferior teeth are held" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0000150 abnormal rib morphology "malformed bones forming the bony wall of the chest" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:50311]
Show

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Bmp4tm1Blh/Bmp4+,Gpc3tm1Snd/Y
Genetic Background: involves: 129S2/SvPas * 129X1/SvJ * C57BL/6

 MP:0000154 rib fusion "appearance of one or more ribs as a single structure" [J:62022, J:62023]
Show

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Bmp4tm1Blh/Bmp4+,Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6

Allelic Composition: Bmp4tm1Blh/Bmp4+,Gpc3tm1Snd/Y
Genetic Background: involves: 129S2/SvPas * 129X1/SvJ * C57BL/6

 MP:0000189 hypoglycemia "low levels of plasma glucose in the circulating blood; this generally refers to a pathological state" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0000284 double outlet right ventricle "both the aorta and the pulmonary trunk originate from the right ventricle, usually in conjunction with a ventricular septal defect" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:67826]
Show

Allelic Composition: Angptl3tm1Lex/Angptl3tm1Lex,Ldlrtm1Her/Ldlrtm1Her
Genetic Background: involves: 129S5/SvEvBrd * 129S7/SvEvBrd * C57BL/6

 MP:0000373 belly spot "the appearance of a round area of white fur on the belly" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Rasgrp1tm1Jstn/Rasgrp1tm1Jstn,Rasgrp3tm1Jstn/Rasgrp3tm1Jstn
Genetic Background: involves: 129P3/J * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Arge/Gpc3+
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0000460 mandible hypoplasia "arrested growth or atrophy of the lower bony framework of the mouth where the inferior teeth are held" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator, J:54637]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0000477 abnormal intestine morphology "malformation of the digestive tube passing from the stomach to the anus" [J:48968]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0000480 increased number of ribs "greater than normal numbers of the pairs of bony structures that make up the body wall" [MeSH:National Library of Medicine - Medical Subject Headings, 2003]
Show

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

 MP:0000519 hydronephrosis "dilation of the pelvis and calices of one or both kidneys" [J:56641]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0000521 abnormal kidney cortex "anomalous structure or development of the outer area of the kidney, which contains the glomerular capillaries and the capsula glomeruli that enclose it " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0000522 cysts in kidney cortex "abnormal membranous sacs appearing in the renal lobules, tubules and glomeruli" [J:50844]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0000527 abnormal kidney development "anomalous differentiation of the paired organs responsible for urine secretion" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Fil/Gpc3+
Genetic Background: B6.Cg-Gpc3tm1Fil

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0000556 abnormal hindlimb morphology "malformation of the entire posterior extremities" [MGI:tc]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,Igf1rtm1Arge/Igf1rtm1Arge
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J

 MP:0000562 polydactyly "greater than 5 digits on one or more autopods" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Bmp4tm1Blh/Bmp4+,Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6

Allelic Composition: Bmp4tm1Blh/Bmp4+,Gpc3tm1Snd/Y
Genetic Background: involves: 129S2/SvPas * 129X1/SvJ * C57BL/6

 MP:0000692 small spleen "decreased spleen size" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0001123 dilated uterus "stretched or enlarged female muscular organ of gestation" [J:50844]
Show

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0001144 fused vaginal opening "condition in which the external vaginal opening is closed by the adherence of the epithelium of the vagina" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0001260 increased body weight "greater than normal average weight " [J:33400]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Fil/Gpc3+
Genetic Background: B6.Cg-Gpc3tm1Fil

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0001264 increased body size "larger than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:33401]
Show

Allelic Composition: Angptl3tm1Lex/Angptl3tm1Lex,Ldlrtm1Her/Ldlrtm1Her
Genetic Background: involves: 129S5/SvEvBrd * 129S7/SvEvBrd * C57BL/6

Allelic Composition: Gpc3tm1Snd/Gpc3+
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001270 distended abdomen "abdomen appears curved outward or swollen; can be due to skeletal axial defects, enlarged visceral organs or megacolon" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0001699 enlarged embryo size "larger proportions of embryo compared to littermates" [cwg:Carroll W. Goldsmith, Mouse Genome Informatics Curator]
Show

Allelic Composition: Coq7tm1Hek/Coq7+
Genetic Background: B6.129-Coq7tm1Hek

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0001861 lung inflammation "local accumulation of fluid, plasma proteins, and leukocytes in the lung" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0001867 rhinitis "inflammation of the mucous membrane of the nose" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator, J:60896]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0002135 abnormal kidney morphology "abnormal development of the kidney resulting in structural abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0002398 abnormal bone marrow cell morphology/development "anomalous structure or formation of the cells found in the bone marrow" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Myh9tm5Rsad/Myh9tm5Rsad,Tg(Nphs2-cre)1Seq/0
Genetic Background: involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ

 MP:0002412 increased susceptibility to bacterial infection "greater likelihood that an organism will develop ill effects from a bacterial infection or from components of or toxins produced by bacteria" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0002705 dilated renal tubules "enlarged lumens of the loops of Henle and/or collecting ducts of the kidney" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0002707 abnormal kidney weight "anomaly in the heft of the organs responsible for urine secretion" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0002938 white spotting "the appearance of patches of white fur" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Rasgrp1tm1Jstn/Rasgrp1tm1Jstn,Rasgrp3tm1Jstn/Rasgrp3tm1Jstn
Genetic Background: involves: 129P3/J * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Arge/Gpc3+
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0003014 abnormal kidney medulla morphology "anomalous structure of the inner portion of the kidney consisting of the renal pyramids" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:88636, smb:Susan M. Bello , Mouse Genome Informatics Curator]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3tm1Snd/Gpc3+
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0003052 omphalocele "protrusion of abdominal viscera at the base of the umbilical cord, with a covering membranous sac of peritoneum-amnion" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8, MeSH:National Library of Medicine - Medical Subject Headings, 2003, ava:Anna V. Anagnostopoulos, Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

 MP:0003068 enlarged kidney "larger than average size of the kidney" [J:86005, pvb:Pierre Vanden Borre, Mouse Genome Informatics Curator]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0003122 maternal imprinting "specific loci are inactivated during oogenesis and are not expressed in offspring" [llw2:Linda Washburn, Mouse Genome Informatics Curator, csmith:Cynthia L. Smith, Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3+,Igf2tm1Rob/Igf2+
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Y,Igf2tm1Rob/Igf2+
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J

 MP:0003123 paternal imprinting "specific loci are inactivated during spermatogenesis and are not expressed in offspring " [csmith:Cynthia L. Smith, Mouse Genome Informatics Curator, llw2:Linda Washburn, Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

 MP:0003139 patent ductus arteriosus "failure of the fetal connection between the aorta and pulmonary artery to close within 24 hours after birth" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0003315 abnormal perineum morphology "malformation in the area between the genital organs and the anus that lies beneath the pelvic diaphragm" [ncbi:Matthew Mailman, NCBI request, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0003384 abnormal ventral body wall "malformation in the anterior portion of a human body or the lower surface of an animal body comprised of ectoderm and mesoderm layers that encloses the body cavity" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3tm1Snd/Gpc3+
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0003675 kidney cysts "abnormal membranous sacs in any portion of the pair of organs responsible for urine secretion" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Fil/Gpc3+
Genetic Background: B6.Cg-Gpc3tm1Fil

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3Gt(Ex136)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3tm1Snd/Gpc3+
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0003956 abnormal body size "anomaly in the average body weight, height and/or length of an organism compared to controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3+,Igf2tm1Rob/Igf2+
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Y,Igf2tm1Rob/Igf2+
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J

 MP:0004678 split xiphoid process "the appearance of an abnormal division of the posterior tip of the sternum" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3tm1Snd/Gpc3+
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0004754 abnormal kidney collecting duct "any structural anomaly of the duct that drains fluid from the nephron and either allows bodily reabsorbtion of water or allows the fluid to drain to the bladder via the ureter; the collecting duct system also maintains acid-base homeostasis" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0004810 decreased hematopoietic stem cell number "reduced cell count of the multipotent, self-renewing stem cells found in the bone marrow and the fetal liver; these give rise to all the types of both the myeloid and lymphoid cell lineages" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Myh9tm5Rsad/Myh9tm5Rsad,Tg(Nphs2-cre)1Seq/0
Genetic Background: involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ

 MP:0004920 increased placenta weight "increase in the weight of the organ of metabolic interchange between fetus and mother" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Rasgrp1tm1Jstn/Rasgrp1tm1Jstn,Rasgrp3tm1Jstn/Rasgrp3tm1Jstn
Genetic Background: involves: 129P3/J * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

 MP:0004936 abnormal ureteric bud branching morphogenesis "partial or complete failure of the ureteric bud to repeatedly divide into lobules during development of the kidney" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Fil/Gpc3+
Genetic Background: B6.Cg-Gpc3tm1Fil

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0004953 decreased spleen weight "reduction in the average weight of the organ that functions to filter blood and to store red corpuscles and platelets" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0005584 abnormal enzyme/coenzyme activity "altered ability of any of these proteins, or their cofactors, to act as catalysts to induce chemical changes in other substances" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0005630 increased lung weight "greater than the normal state of the physical heaviness of the lung" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0006032 abnormal ureteric bud morphology "anomaly in the formation or development of the ureteric bud that with the metanephric mesenchyme gives rise to the kidneys " [smb:Susan M Bello, Mouse Genome Informatics Curator, J:57313:]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Fil/Gpc3+
Genetic Background: B6.Cg-Gpc3tm1Fil

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0008146 asymmetric rib-sternum attachment "loss of bilateral symmetry in rib attachments to the sternum" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

 MP:0008272 abnormal endochondral bone ossification "anomaly in the process of the formation of bone by the replacement of cartilage tissue with mineralized bone" [GO:0001958]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0008277 abnormal sternum ossification "anomaly in the process of the formation of the sternum bone by the replacement of cartilage tissue with mineralized bone" [GO:0001958, MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Bmp4tm1Blh/Bmp4+,Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6

Allelic Composition: Bmp4tm1Blh/Bmp4+,Gpc3tm1Snd/Y
Genetic Background: involves: 129S2/SvPas * 129X1/SvJ * C57BL/6

 MP:0008396 abnormal osteoclast differentiation "atypical production of or inability to produce bone resorpting cells that remove bone tissue by degrading the mineralized matrix" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0008470 abnormal spleen B cell follicle morphology "any structural anomaly of the area of the white pulp where the affinity maturation of B cells and the generation of memory B cells and plasma cells occur" [PMID:17495967]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0009728 abnormal calcaneum morphology "any structural anomaly of the largest quadrangular bone at the back of the tarsus; it forms the heel or hock and articulates with the talus above it" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,Igf1rtm1Arge/Igf1rtm1Arge
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J

 MP:0010146 umbilical hernia "an outward bulging (protrusion) of the abdominal lining or part of the abdominal organ(s) through the area around the umbilicus; occurs when the muscle through which blood vessels pass to feed the developing fetus fails to completely close" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator", PMID:20333300]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010402 ventricular septal defect "abnormal communications between the two lower chambers of the heart, including such defects in the perimembranous, inlet, outlet (infundibular), central muscular, marginal muscular, or apical muscular regions" [MESH:C14.240.400.560.540]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010413 complete atrioventricular septal defect "a type of atrioventricular septal defect in which a single atrioventricular valve annulus, a common atrioventricular valve, and a defect of the inlet ventricular septum are observed; deficiency of the atrioventricular septum also results in the presence of a large primum atrial septal defect" [http://emedicine.medscape.com]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010418 perimembraneous ventricular septal defect "abnormal communications between the two lower chambers of the heart, occurring in the membranous septum with defects in the adjacent muscular portion of the septum; it is generally located in the LV outflow tract just below the aortic valve, associated with pouches or aneurysms of the septal leaflet of the tricuspid valve, which may partially or completely close the defect; an LV-to-RA shunt may also be associated with this defect" [http://emedicine.medscape.com]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010419 inlet ventricular septal defect "abnormal communications between the two lower chambers of the heart, located posterior to the septal leaflet of the tricuspid valve and which are not associated with defects of the atrioventricular valves" [http://emedicine.medscape.com]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010476 coronary fistula "an abnormal communication between the terminus of a coronary artery, bypassing the myocardial capillary bed and entering either a chamber of the heart (coronary-cameral fistula) or any segment of the systemic or pulmonary circulation (coronary arteriovenous fistula)" [http://emedicine.medscape.com]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010551 abnormal coronary vessel morphology "any structural anomaly of any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010607 common atrioventricular valve "the presence of a single atrioventricular valve instead of both a mitral and tricuspid valve, most commonly due to incomplete or failure of fetal atrioventricular canal septation" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0010763 abnormal hematopoietic stem cell physiology "any functional anomaly or number of the multipotent, self-renewing stem cells found in the bone marrow and the fetal liver; HSCs give rise to all the types of both the myeloid and lymphoid cell lineages" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Myh9tm5Rsad/Myh9tm5Rsad,Tg(Nphs2-cre)1Seq/0
Genetic Background: involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ

 MP:0010981 abnormal branching involved in ureteric bud morphogenesis "anomaly in the process in which the branching structure of the ureteric bud is generated and organized" [GO:0001658]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0011085 complete postnatal lethality "premature death anytime between the neonatal period and weaning age of all organisms of a given genotype in a population (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,Igf1tm1Arge/Igf1tm1Arge
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J * DBA * MF1

Allelic Composition: Gpc3tm1Arge/Y,Igf1tm1Arge/Igf1tm1Arge
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J * DBA * MF1

 MP:0011086 partial postnatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms anytime between the neonatal period and weaning age (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Cckartm1Kym/Cckartm1Kym,Cckbrtm1Tom/Cckbrtm1Tom
Genetic Background: involves: 129S4/SvJae * C57BL/6J

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Fil/Gpc3tm1Fil
Genetic Background: B6.Cg-Gpc3tm1Fil

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3Gt(Ex136)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
Show

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,Igf1rtm1Arge/Igf1rtm1Arge
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J

 MP:0011090 partial perinatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
Show

Allelic Composition: Gpc3tm1Arge/Y,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,H19tm1Tilg/H19+
Genetic Background: involves: 129S/SvEv * 129S1/Sv

Allelic Composition: Gpc3tm1Arge/Gpc3tm1Arge,Igf1tm1Arge/Igf1tm1Arge
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J * DBA * MF1

Allelic Composition: Gpc3tm1Arge/Y,Igf1tm1Arge/Igf1tm1Arge
Genetic Background: involves: 129S/SvEv * 129S1/Sv * C57BL/6J * DBA * MF1

Allelic Composition: Gpc3tm1Snd/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011307 kidney medulla cysts "abnormal membranous sacs appearing in the inner portion of the kidney which consists of the renal pyramids" [MGI:anna]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

Allelic Composition: Gpc3Gt(Ex136)Byg/Y
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gpc3Gt(Ex136)Byg/Gpc3+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011308 kidney corticomedullary cysts "development of abnormal membranous sacs in the corticomedullary junction of the kidney" [MGI:anna]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0011423 kidney cortex atrophy "acquired diminution of the size of the outer portion of the kidney located between the renal capsule and the renal medulla, associated with wasting as from death and reabsorbtion of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal changes" [MGI:anna]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

 MP:0011520 increased placental labyrinth size "increase in the size of the structure where embryonic blood vessels are surrounded by trophoblast cells and maternal blood" [MGI:csmith]
Show

Allelic Composition: Gpc3tm1Arge/Y
Genetic Background: either: (involves: 129S/SvEv * 129S1/Sv) or (involves: 129S1/Sv * C57BL/6J)

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr