ENSGALG00000006969


Gallus gallus

Features
Gene ID: ENSGALG00000006969
  
Biological name :USP28
  
Synonyms : ubiquitin carboxyl-terminal hydrolase 28 / USP28
  
Possible biological names infered from orthology : Q5I043 / Q96RU2 / ubiquitin specific peptidase 28
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 4421991
Gene end: 4443644
  
Corresponding Affymetrix probe sets: GgaAffx.12952.1.S1_at (Chicken Array)   GgaAffx.4361.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044350
Ensembl peptide - ENSGALP00000060779
Ensembl peptide - ENSGALP00000011273
NCBI entrez gene - 428246     See in Manteia.
RefSeq - XM_015298019
RefSeq - XM_015298014
RefSeq - XM_015298015
RefSeq - XM_015298016
RefSeq - XM_015298017
RefSeq - NM_001031496
RefSeq - XM_015298012
RefSeq - XM_015298013
RefSeq Peptide - NP_001026667
swissprot - A0A1L1RPR9
swissprot - F1NHA0
swissprot - A0A1D5NVH5
Ensembl - ENSGALG00000006969
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp28ENSDARG00000008880Danio rerio
 USP28ENSG00000048028Homo sapiens
 Usp28ENSMUSG00000032267Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP25 / ubiquitin specific peptidase 25 / P57080* / Q9UHP3*ENSGALG0000001569348


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR009060  UBA-like superfamily
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000077 DNA damage checkpoint IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007265 Ras protein signal transduction IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0010212 response to ionizing radiation IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0031647 regulation of protein stability IEA
 biological_processGO:0034644 cellular response to UV IEA
 biological_processGO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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