ENSGALG00000006974


Gallus gallus

Features
Gene ID: ENSGALG00000006974
  
Biological name :DDX27
  
Synonyms : DDX27 / probable ATP-dependent RNA helicase DDX27
  
Possible biological names infered from orthology : DEAD-box helicase 27 / Q921N6 / Q96GQ7
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 10955982
Gene end: 10961936
  
Corresponding Affymetrix probe sets: Gga.5530.1.S1_at (Chicken Array)   GgaAffx.11907.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000063287
Ensembl peptide - ENSGALP00000038272
NCBI entrez gene - 419308     See in Manteia.
RefSeq - NM_001006293
RefSeq Peptide - NP_001006293
swissprot - F1NQV5
swissprot - A0A1L1RWS6
Ensembl - ENSGALG00000006974
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx27ENSDARG00000091831Danio rerio
 DDX27ENSG00000124228Homo sapiens
 Ddx27ENSMUSG00000017999Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr