ENSMUSG00000017999


Mus musculus

Features
Gene ID: ENSMUSG00000017999
  
Biological name :Ddx27
  
Synonyms : Ddx27 / Probable ATP-dependent RNA helicase DDX27 / Q921N6
  
Possible biological names infered from orthology : DEAD-box helicase 27 / Q96GQ7
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H3
Gene start: 167015193
Gene end: 167034947
  
Corresponding Affymetrix probe sets: 10478825 (MoGene1.0st)   1424161_at (Mouse Genome 430 2.0 Array)   1425541_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000018143
Ensembl peptide - ENSMUSP00000135265
Ensembl peptide - ENSMUSP00000135815
NCBI entrez gene - 228889     See in Manteia.
MGI - MGI:2385884
RefSeq - NM_153065
RefSeq - XM_006499422
RefSeq Peptide - NP_694705
swissprot - H3BLJ6
swissprot - Q921N6
Ensembl - ENSMUSG00000017999
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx27ENSDARG00000091831Danio rerio
 DDX27ENSGALG00000006974Gallus gallus
 DDX27ENSG00000124228Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing ISO
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome ISO
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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