ENSGALG00000007393


Gallus gallus

Features
Gene ID: ENSGALG00000007393
  
Biological name :SUDS3
  
Synonyms : SDS3 homolog, SIN3A corepressor complex component / SUDS3
  
Possible biological names infered from orthology : Q8BR65 / Q9H7L9 / Sin3 histone deacetylase corepressor complex component SDS3
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 9839497
Gene end: 9862183
  
Corresponding Affymetrix probe sets: GgaAffx.20331.1.S1_s_at (Chicken Array)   GgaAffx.4601.1.S1_at (Chicken Array)   GgaAffx.4601.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046188
Ensembl peptide - ENSGALP00000011947
NCBI entrez gene - 427713     See in Manteia.
RefSeq - XM_015275338
RefSeq - NM_001031471
RefSeq Peptide - NP_001026642
swissprot - Q5ZHZ8
swissprot - A0A1D5P0L0
Ensembl - ENSGALG00000007393
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 suds3ENSDARG00000073737Danio rerio
 SUDS3ENSG00000111707Homo sapiens
 Suds3ENSMUSG00000066900Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013907  Sds3-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016580 Sin3 complex ISS
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0004407 histone deacetylase activity IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0042826 histone deacetylase binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr