ENSGALG00000007839


Gallus gallus

Features
Gene ID: ENSGALG00000007839
  
Biological name :NCAM1
  
Synonyms : Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. / NCAM1
  
Possible biological names infered from orthology : neural cell adhesion molecule 1 / neural cell adhesion molecule 1 isoform 3 / P13591
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 5780707
Gene end: 5862536
  
Corresponding Affymetrix probe sets: Gga.1794.1.S1_at (Chicken Array)   GgaAffx.22381.1.S1_s_at (Chicken Array)   GgaAffx.22381.3.S1_at (Chicken Array)   GgaAffx.22381.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055001
Ensembl peptide - ENSGALP00000039725
Ensembl peptide - ENSGALP00000058150
Ensembl peptide - ENSGALP00000044433
Ensembl peptide - ENSGALP00000050743
Ensembl peptide - ENSGALP00000012709
NCBI entrez gene - 428253     See in Manteia.
RefSeq - XM_015298048
RefSeq - XM_015298040
RefSeq - XM_015298041
RefSeq - XM_015298042
RefSeq - XM_015298043
RefSeq - XM_015298044
RefSeq - XM_015298045
RefSeq - XM_015298046
RefSeq - XM_015298047
RefSeq - NM_001128828
RefSeq - NM_001242604
RefSeq - XM_015298032
RefSeq - XM_015298033
RefSeq - XM_015298034
RefSeq - XM_015298035
RefSeq - XM_015298036
RefSeq - XM_015298037
RefSeq - XM_015298038
RefSeq Peptide - NP_001229533
RefSeq Peptide - NP_001122300
swissprot - A0A1D5PD99
swissprot - F1NLB3
swissprot - A0A1D5PYU2
swissprot - A0A1D5NVQ7
swissprot - F1NYN0
swissprot - A0A1D5PQ40
Ensembl - ENSGALG00000007839
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncam1aENSDARG00000056181Danio rerio
 ncam1bENSDARG00000007220Danio rerio
 NCAM1ENSG00000149294Homo sapiens
 Ncam1ENSMUSG00000039542Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NCAM2 / neural cell adhesion molecule 2 / O15394* / O35136*ENSGALG0000001573733
ROBO1 / roundabout guidance receptor 1 / Q9Y6N7*ENSGALG0000001551119
ROBO2 / roundabout guidance receptor 2 / Q9HCK4*ENSGALG0000001551917
CDON / cell adhesion associated, oncogene regulated / Q32MD9* / Q4KMG0* / Cell adhesion molecule-related/down-regulated by oncos *ENSGALG0000003541915
ROBO3 / roundabout guidance receptor 3 / Q96MS0*ENSGALG0000004581615
BOC / BOC cell adhesion associated, oncogene regulated / Q9BWV1*ENSGALG0000001515214
ROBO4* / Q8WZ75* / roundabout guidance receptor 4*ENSGALG000000430887
ENSGALG000000288632
ENSGALG000000421042


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR009138  Neural cell adhesion
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR033019  Neural cell adhesion molecule 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
NCAM signaling for neurite out-growth
NCAM1 interactions
RAF/MAP kinase cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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