ENSGALG00000008304


Gallus gallus

Features
Gene ID: ENSGALG00000008304
  
Biological name :STN1
  
Synonyms : STN1 / STN1, CST complex subunit
  
Possible biological names infered from orthology : CST complex subunit STN1 / Q8K2X3 / Q9H668
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 24046976
Gene end: 24085371
  
Corresponding Affymetrix probe sets: GgaAffx.5245.1.S1_at (Chicken Array)   GgaAffx.5245.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013504
Ensembl peptide - ENSGALP00000056004
NCBI entrez gene - 423877     See in Manteia.
RefSeq - XM_015288718
RefSeq - XM_015288719
RefSeq - XM_015288720
RefSeq - XM_015288721
swissprot - E1BQW9
swissprot - A0A1D5PSW4
Ensembl - ENSGALG00000008304
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stn1ENSDARG00000007734Danio rerio
 STN1ENSG00000107960Homo sapiens
 Stn1ENSMUSG00000042694Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004365  OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
 IPR011991  ArsR-like helix-turn-helix domain
 IPR012340  Nucleic acid-binding, OB-fold
 IPR014647  CST complex subunit Stn1
 IPR015253  Stn1, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0010833 telomere maintenance via telomere lengthening IEA
 biological_processGO:0016233 telomere capping IEA
 biological_processGO:0032211 negative regulation of telomere maintenance via telomerase IEA
 biological_processGO:0045740 positive regulation of DNA replication IEA
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IEA
 cellular_componentGO:1990879 CST complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0042162 telomeric DNA binding IEA
 molecular_functionGO:0043047 single-stranded telomeric DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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