ENSGALG00000008452


Gallus gallus

Features
Gene ID: ENSGALG00000008452
  
Biological name :IFT122
  
Synonyms : IFT122 / intraflagellar transport 122
  
Possible biological names infered from orthology : Intraflagellar transport / Q6NWV3 / Q9HBG6
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 19519716
Gene end: 19550074
  
Corresponding Affymetrix probe sets: Gga.14400.1.S1_at (Chicken Array)   Gga.7227.1.S1_s_at (Chicken Array)   GgaAffx.5327.1.S1_at (Chicken Array)   GgaAffx.5327.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055092
Ensembl peptide - ENSGALP00000013755
NCBI entrez gene - 416123     See in Manteia.
RefSeq - XM_015293171
RefSeq - XM_015293170
swissprot - F1P3M3
swissprot - A0A1D5PQD0
Ensembl - ENSGALG00000008452
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IFT122ENSG00000163913Homo sapiens
 Ift122ENSMUSG00000030323Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0007227 signal transduction downstream of smoothened IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0010172 embryonic body morphogenesis IEA
 biological_processGO:0021914 negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning IEA
 biological_processGO:0035050 embryonic heart tube development IEA
 biological_processGO:0035115 embryonic forelimb morphogenesis IEA
 biological_processGO:0035720 intraciliary anterograde transport IEA
 biological_processGO:0035721 intraciliary retrograde transport IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0045879 negative regulation of smoothened signaling pathway IEA
 biological_processGO:0048593 camera-type eye morphogenesis IEA
 biological_processGO:0050680 negative regulation of epithelial cell proliferation IEA
 biological_processGO:0060173 limb development IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0060830 ciliary receptor clustering involved in smoothened signaling pathway IEA
 biological_processGO:0060831 smoothened signaling pathway involved in dorsal/ventral neural tube patterning IEA
 biological_processGO:0060971 embryonic heart tube left/right pattern formation IEA
 biological_processGO:0061512 protein localization to cilium IEA
 biological_processGO:0072594 establishment of protein localization to organelle IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0030991 intraciliary transport particle A IEA
 cellular_componentGO:0032391 photoreceptor connecting cilium IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 cellular_componentGO:0097546 ciliary base IEA


Pathways (from Reactome)
Pathway description
Hedgehog off state
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000010956 TTC21B / tetratricopeptide repeat domain 21B / Q0HA38* / Q7Z4L5*  / complex
 ENSGALG00000009318 IFT140 / intraflagellar transport 140 / E9PY46* / Q96RY7* / Intraflagellar transport *  / complex






 

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