ENSGALG00000008456


Gallus gallus

Features
Gene ID: ENSGALG00000008456
  
Biological name :CACNA1B
  
Synonyms : CACNA1B / voltage-dependent N-type calcium channel subunit alpha-1B
  
Possible biological names infered from orthology : calcium voltage-gated channel subunit alpha1 B / O55017 / Q00975
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 2601746
Gene end: 2859437
  
Corresponding Affymetrix probe sets: Gga.19499.1.A1_at (Chicken Array)   Gga.19499.1.S1_at (Chicken Array)   Gga.4317.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000039303
Ensembl peptide - ENSGALP00000039311
NCBI entrez gene - 374169     See in Manteia.
RefSeq - XM_015279281
RefSeq - XM_015279278
RefSeq - XM_015279279
RefSeq - XM_015279280
RefSeq - NM_204293
RefSeq - XM_015279261
RefSeq - XM_015279262
RefSeq - XM_015279263
RefSeq - XM_015279264
RefSeq - XM_015279265
RefSeq - XM_015279266
RefSeq - XM_015279267
RefSeq - XM_015279268
RefSeq - XM_015279269
RefSeq - XM_015279270
RefSeq - XM_015279271
RefSeq - XM_015279272
RefSeq - XM_015279273
RefSeq - XM_015279274
RefSeq - XM_015279275
RefSeq - XM_015279276
RefSeq - XM_015279277
RefSeq Peptide - NP_989624
swissprot - F1NY22
swissprot - F1NXH0
Ensembl - ENSGALG00000008456
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cacna1baENSDARG00000021735Danio rerio
 cacna1bbENSDARG00000079295Danio rerio
 Q00975ENSG00000148408Homo sapiens
 O55017ENSMUSG00000004113Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CACNA1E / calcium voltage-gated channel subunit alpha1 E / Q15878*ENSGALG0000000383354
CACNA1C / calcium voltage-gated channel subunit alpha1 C / Q01815* / Q13936* / Voltage-dependent L-type calcium channel subunit alpha-1C *ENSGALG0000001302236
O73700 / CACNA1D / Voltage-dependent L-type calcium channel subunit alpha-1D / Q01668* / Q99246* / calcium voltage-gated channel subunit alpha1 D*ENSGALG0000000533235
CACNA1S / voltage-dependent L-type calcium channel subunit alpha-1S isoform 1 / Q13698* / calcium voltage-gated channel subunit alpha1 S*ENSGALG0000003774433
NALCN / sodium leak channel, non-selective / Q8IZF0*ENSGALG0000001686816


Protein motifs (from Interpro)
Interpro ID Name
 IPR002077  Voltage-dependent calcium channel, alpha-1 subunit
 IPR005447  Voltage-dependent calcium channel, N-type, alpha-1 subunit
 IPR005821  Ion transport domain
 IPR014873  Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
 IPR027359  Voltage-dependent channel domain superfamily
 IPR031649  Voltage-dependent L-type calcium channel, IQ-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0007269 neurotransmitter secretion IEA
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0008016 regulation of heart contraction IEA
 biological_processGO:0008217 regulation of blood pressure IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0048265 response to pain IEA
 biological_processGO:0051924 regulation of calcium ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0008331 high voltage-gated calcium channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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