ENSGALG00000037744


Gallus gallus

Features
Gene ID: ENSGALG00000037744
  
Biological name :CACNA1S
  
Synonyms : CACNA1S / voltage-dependent L-type calcium channel subunit alpha-1S isoform 1
  
Possible biological names infered from orthology : calcium voltage-gated channel subunit alpha1 S / Q13698
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 251343
Gene end: 280200
  
Corresponding Affymetrix probe sets: Gga.582.1.S1_s_at (Chicken Array)   GgaAffx.21948.1.S1_s_at (Chicken Array)   GgaAffx.21948.3.S1_at (Chicken Array)   GgaAffx.419.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056240
Ensembl peptide - ENSGALP00000056760
NCBI entrez gene - 395985     See in Manteia.
RefSeq - XM_015298692
RefSeq - NM_001305147
RefSeq - NM_001305148
RefSeq Peptide - NP_001292076
RefSeq Peptide - NP_001292077
swissprot - A0A1D5PTJ2
swissprot - A0A1D5PV02
Ensembl - ENSGALG00000037744
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cacna1saENSDARG00000029457Danio rerio
 cacna1sbENSDARG00000042552Danio rerio
 Q13698ENSG00000081248Homo sapiens
 Cacna1sENSMUSG00000026407Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O73700 / CACNA1D / Voltage-dependent L-type calcium channel subunit alpha-1D / Q01668* / Q99246* / calcium voltage-gated channel subunit alpha1 D*ENSGALG0000000533264
CACNA1C / calcium voltage-gated channel subunit alpha1 C / Q01815* / Q13936* / Voltage-dependent L-type calcium channel subunit alpha-1C *ENSGALG0000001302263
CACNA1B / voltage-dependent N-type calcium channel subunit alpha-1B / O55017* / Q00975* / calcium voltage-gated channel subunit alpha1 B*ENSGALG0000000845641
CACNA1E / calcium voltage-gated channel subunit alpha1 E / Q15878*ENSGALG0000000383339
NALCN / sodium leak channel, non-selective / Q8IZF0*ENSGALG0000001686819


Protein motifs (from Interpro)
Interpro ID Name
 IPR002077  Voltage-dependent calcium channel, alpha-1 subunit
 IPR005446  Voltage-dependent calcium channel, L-type, alpha-1 subunit
 IPR005450  Voltage-dependent calcium channel, L-type, alpha-1S subunit
 IPR005821  Ion transport domain
 IPR014873  Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
 IPR027359  Voltage-dependent channel domain superfamily
 IPR031649  Voltage-dependent L-type calcium channel, IQ-associated domain
 IPR031688  Voltage-gated calcium channel subunit alpha, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006936 muscle contraction IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030315 T-tubule IEA
 cellular_componentGO:0031674 I band IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0008331 high voltage-gated calcium channel activity IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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