ENSGALG00000008470


Gallus gallus

Features
Gene ID: ENSGALG00000008470
  
Biological name :WDR12
  
Synonyms : WDR12 / WD repeat domain 12
  
Possible biological names infered from orthology : Q9GZL7 / Q9JJA4
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 12026423
Gene end: 12034243
  
Corresponding Affymetrix probe sets: Gga.12599.1.S1_s_at (Chicken Array)   Gga.12630.1.S1_s_at (Chicken Array)   GgaAffx.21435.1.S1_x_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013788
Ensembl peptide - ENSGALP00000060881
NCBI entrez gene - 424089     See in Manteia.
RefSeq - XM_015289504
swissprot - A0A1L1RQ17
swissprot - F1P2Y8
Ensembl - ENSGALG00000008470
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr12ENSDARG00000003287Danio rerio
 WDR12ENSG00000138442Homo sapiens
 Wdr12ENSMUSG00000026019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR012972  NLE
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR028599  WD repeat WDR12/Ytm1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000460 maturation of 5.8S rRNA IBA
 biological_processGO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
 biological_processGO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0007219 Notch signaling pathway IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030687 preribosome, large subunit precursor IEA
 cellular_componentGO:0070545 PeBoW complex IEA
 molecular_functionGO:0043021 ribonucleoprotein complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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