ENSGALG00000008564


Gallus gallus

Features
Gene ID: ENSGALG00000008564
  
Biological name :NSUN6
  
Synonyms : NOP2/Sun RNA methyltransferase family member 6 / NSUN6
  
Possible biological names infered from orthology : Putative methyltransferase NSUN6 / Q7TS68 / Q8TEA1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 19122855
Gene end: 19142014
  
Corresponding Affymetrix probe sets: GgaAffx.22629.1.S1_at (Chicken Array)   GgaAffx.5394.1.S1_at (Chicken Array)   GgaAffx.5394.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013934
NCBI entrez gene - 428419     See in Manteia.
RefSeq - XM_004939248
RefSeq - XM_004939249
RefSeq - XM_004939250
swissprot - E1BQJ7
Ensembl - ENSGALG00000008564
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nsun6ENSDARG00000103478Danio rerio
 NSUN6ENSG00000241058Homo sapiens
 Nsun6ENSMUSG00000026707Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NSUN3 / NOP2/Sun RNA methyltransferase family member 3 / Q8CCT7* / Q9H649* / tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial *ENSGALG0000001541417
NOP2 / NOP2 nucleolar protein / P46087*ENSGALG0000003780716
NSUN4 / 5-methylcytosine rRNA methyltransferase NSUN4 / Q9CZ57* / C4P6S0* / Q96CB9* / NOP2/Sun RNA methyltransferase family member 4*ENSGALG0000001036015


Protein motifs (from Interpro)
Interpro ID Name
 IPR001678  SAM-dependent methyltransferase RsmB/NOP2-type
 IPR002478  PUA domain
 IPR015947  PUA-like superfamily
 IPR018314  Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site
 IPR023267  RNA (C5-cytosine) methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IBA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IBA
 molecular_functionGO:0008757 S-adenosylmethionine-dependent methyltransferase activity IBA
 molecular_functionGO:0016428 tRNA (cytosine-5-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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