ENSGALG00000015414


Gallus gallus

Features
Gene ID: ENSGALG00000015414
  
Biological name :NSUN3
  
Synonyms : NOP2/Sun RNA methyltransferase family member 3 / NSUN3
  
Possible biological names infered from orthology : Q8CCT7 / Q9H649 / tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 89747329
Gene end: 89765411
  
Corresponding Affymetrix probe sets: Gga.10686.1.S1_at (Chicken Array)   Gga.10806.1.S1_at (Chicken Array)   Gga.11918.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024818
Ensembl peptide - ENSGALP00000053085
Ensembl peptide - ENSGALP00000044801
NCBI entrez gene - 418432     See in Manteia.
RefSeq - XM_004938314
RefSeq - XM_015297960
RefSeq - XM_416643
swissprot - A0A1D5PJT9
swissprot - A0A1D5NWQ9
swissprot - F1NUQ8
Ensembl - ENSGALG00000015414
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NSUN3ENSDARG00000013023Danio rerio
 NSUN3ENSG00000178694Homo sapiens
 Nsun3ENSMUSG00000050312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NSUN4 / 5-methylcytosine rRNA methyltransferase NSUN4 / Q9CZ57* / C4P6S0* / Q96CB9* / NOP2/Sun RNA methyltransferase family member 4*ENSGALG0000001036031
NSUN6 / NOP2/Sun RNA methyltransferase family member 6 / Q7TS68* / Q8TEA1* / Putative methyltransferase NSUN6 *ENSGALG0000000856422
NOP2 / NOP2 nucleolar protein / P46087*ENSGALG0000003780718


Protein motifs (from Interpro)
Interpro ID Name
 IPR001678  SAM-dependent methyltransferase RsmB/NOP2-type
 IPR023267  RNA (C5-cytosine) methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002127 tRNA wobble base cytosine methylation IEA
 biological_processGO:0031167 rRNA methylation IBA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0070129 regulation of mitochondrial translation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0005762 mitochondrial large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016428 tRNA (cytosine-5-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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