ENSMUSG00000050312


Mus musculus

Features
Gene ID: ENSMUSG00000050312
  
Biological name :Nsun3
  
Synonyms : Nsun3 / Q8CCT7 / tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial
  
Possible biological names infered from orthology : NOP2/Sun RNA methyltransferase family member 3 / Q9H649
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: C1.3
Gene start: 62732444
Gene end: 62786818
  
Corresponding Affymetrix probe sets: 10440238 (MoGene1.0st)   1430654_at (Mouse Genome 430 2.0 Array)   1436735_at (Mouse Genome 430 2.0 Array)   1437365_at (Mouse Genome 430 2.0 Array)   1444634_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000059720
Ensembl peptide - ENSMUSP00000123643
Ensembl peptide - ENSMUSP00000114448
NCBI entrez gene - 106338     See in Manteia.
MGI - MGI:2146565
RefSeq - NM_178925
RefSeq - XM_006521671
RefSeq Peptide - NP_849256
swissprot - D6RDT7
swissprot - Q8CCT7
swissprot - D3YXZ6
Ensembl - ENSMUSG00000050312
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NSUN3ENSDARG00000013023Danio rerio
 NSUN3ENSGALG00000015414Gallus gallus
 NSUN3ENSG00000178694Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nsun4 / Q9CZ57 / C4P6S0 / 5-methylcytosine rRNA methyltransferase NSUN4 / Q96CB9* / NOP2/Sun RNA methyltransferase family member 4*ENSMUSG0000002870635
Nop2 / NOP2 nucleolar protein / P46087*ENSMUSG0000003827925
Nsun6 / Q7TS68 / Putative methyltransferase NSUN6 / Q8TEA1* / NOP2/Sun RNA methyltransferase family member 6*ENSMUSG0000002670722


Protein motifs (from Interpro)
Interpro ID Name
 IPR001678  SAM-dependent methyltransferase RsmB/NOP2-type
 IPR023267  RNA (C5-cytosine) methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002127 tRNA wobble base cytosine methylation IEA
 biological_processGO:0031167 rRNA methylation IBA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0070129 regulation of mitochondrial translation IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005759 mitochondrial matrix ISO
 cellular_componentGO:0005762 mitochondrial large ribosomal subunit IBA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IBA
 molecular_functionGO:0016428 tRNA (cytosine-5-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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