ENSGALG00000010360


Gallus gallus

Features
Gene ID: ENSGALG00000010360
  
Biological name :NSUN4
  
Synonyms : 5-methylcytosine rRNA methyltransferase NSUN4 / NSUN4
  
Possible biological names infered from orthology : C4P6S0 / NOP2/Sun RNA methyltransferase family member 4 / Q96CB9 / Q9CZ57
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 21671551
Gene end: 21675013
  
Corresponding Affymetrix probe sets: Gga.7668.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016849
Ensembl peptide - ENSGALP00000064127
Ensembl peptide - ENSGALP00000061826
Ensembl peptide - ENSGALP00000058973
NCBI entrez gene - 424613     See in Manteia.
RefSeq - NM_001277592
RefSeq Peptide - NP_001264521
swissprot - E1C522
swissprot - A0A1L1RZ50
swissprot - A0A1L1RSQ1
swissprot - A0A1L1RJP6
Ensembl - ENSGALG00000010360
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nsun4ENSDARG00000021324Danio rerio
 NSUN4ENSG00000117481Homo sapiens
 Nsun4ENSMUSG00000028706Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NSUN3 / NOP2/Sun RNA methyltransferase family member 3 / Q8CCT7* / Q9H649* / tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial *ENSGALG0000001541428
NSUN6 / NOP2/Sun RNA methyltransferase family member 6 / Q7TS68* / Q8TEA1* / Putative methyltransferase NSUN6 *ENSGALG0000000856417
NOP2 / NOP2 nucleolar protein / P46087*ENSGALG0000003780715


Protein motifs (from Interpro)
Interpro ID Name
 IPR001678  SAM-dependent methyltransferase RsmB/NOP2-type
 IPR023267  RNA (C5-cytosine) methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031167 rRNA methylation IBA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0042256 mature ribosome assembly IEA
 biological_processGO:0070131 positive regulation of mitochondrial translation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005762 mitochondrial large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0070181 small ribosomal subunit rRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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