ENSGALG00000008585


Gallus gallus

Features
Gene ID: ENSGALG00000008585
  
Biological name :SMC3
  
Synonyms : SMC3 / structural maintenance of chromosomes 3
  
Possible biological names infered from orthology : Q9CW03 / Q9UQE7 / Structural maintenance of chromosomes protein 3
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 26011102
Gene end: 26031547
  
Corresponding Affymetrix probe sets: Gga.1762.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056417
Ensembl peptide - ENSGALP00000013963
NCBI entrez gene - 395188     See in Manteia.
RefSeq - NM_204517
RefSeq Peptide - NP_989848
swissprot - Q8AWB8
swissprot - A0A1D5PU15
Ensembl - ENSGALG00000008585
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smc3ENSDARG00000019000Danio rerio
 SMC3ENSG00000108055Homo sapiens
 Smc3ENSMUSG00000024974Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003395  RecF/RecN/SMC, N-terminal
 IPR010935  SMCs flexible hinge
 IPR024704  Structural maintenance of chromosomes protein
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination TAS
 biological_processGO:0006275 regulation of DNA replication IEA
 biological_processGO:0007062 sister chromatid cohesion IEA
 biological_processGO:0019827 stem cell population maintenance IEA
 biological_processGO:0032876 negative regulation of DNA endoreduplication IEA
 biological_processGO:0044791 positive regulation by host of viral release from host cell IEA
 biological_processGO:0051276 chromosome organization IEA
 biological_processGO:0051321 meiotic cell cycle IEA
 biological_processGO:0051702 interaction with symbiont IEA
 biological_processGO:1901673 regulation of mitotic spindle assembly IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0000800 lateral element IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0008278 cohesin complex IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 cellular_componentGO:0030893 meiotic cohesin complex IEA
 cellular_componentGO:0034991 nuclear meiotic cohesin complex IEA
 cellular_componentGO:0097431 mitotic spindle pole IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0036033 mediator complex binding IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0048487 beta-tubulin binding IEA
 molecular_functionGO:0070840 dynein complex binding IEA


Pathways (from Reactome)
Pathway description
Separation of Sister Chromatids
Establishment of Sister Chromatid Cohesion
Cohesin Loading onto Chromatin
Resolution of Sister Chromatid Cohesion
SUMOylation of DNA damage response and repair proteins
Homologous recombination repair (HRR) of replication-independent double-strand breaks


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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