ENSGALG00000008864


Gallus gallus

Features
Gene ID: ENSGALG00000008864
  
Biological name :FXR1
  
Synonyms : FMR1 autosomal homolog 1 / FXR1
  
Possible biological names infered from orthology : Fragile X mental retardation syndrome-related protein 1 / P51114 / Q61584
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 17141186
Gene end: 17172079
  
Corresponding Affymetrix probe sets: Gga.8327.2.S1_at (Chicken Array)   Gga.8327.3.S1_a_at (Chicken Array)   GgaAffx.21487.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014383
Ensembl peptide - ENSGALP00000063221
Ensembl peptide - ENSGALP00000060191
Ensembl peptide - ENSGALP00000059766
Ensembl peptide - ENSGALP00000054669
Ensembl peptide - ENSGALP00000053544
Ensembl peptide - ENSGALP00000050751
NCBI entrez gene - 424968     See in Manteia.
RefSeq - XM_015291423
RefSeq - NM_001012601
RefSeq - XM_015291420
RefSeq - XM_015291421
RefSeq - XM_015291422
RefSeq Peptide - NP_001012619
swissprot - A0A1L1RWK9
swissprot - Q5F3S6
swissprot - A0A1L1RN20
swissprot - A0A1L1RLY8
swissprot - A0A1D5PP72
swissprot - A0A1D5PDA7
swissprot - A0A1D5PL30
Ensembl - ENSGALG00000008864
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fxr1ENSDARG00000022968Danio rerio
 FXR1ENSG00000114416Homo sapiens
 Fxr1ENSMUSG00000027680Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FMR1 / fragile X mental retardation 1 / Q06787*ENSGALG0000000917752


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR008395  Agenet-like domain
 IPR022034  Fragile X-related 1 protein, C-terminal core
 IPR032172  Fragile X-related 1 protein, C-terminal region 1
 IPR032177  Fragile X-related 1 protein, C-terminal region 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:2000637 positive regulation of gene silencing by miRNA IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005844 polysome IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0035770 ribonucleoprotein granule IEA
 cellular_componentGO:0043034 costamere IEA
 cellular_componentGO:0043197 dendritic spine IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0002151 G-quadruplex RNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0033592 RNA strand annealing activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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