ENSGALG00000008939


Gallus gallus

Features
Gene ID: ENSGALG00000008939
  
Biological name :FUBP1
  
Synonyms : far upstream element-binding protein 1 / FUBP1
  
Possible biological names infered from orthology : Mus musculus far upstream element (FUSE) binding protein 1 (Fubp1), transcript variant 7, mRNA. / Q91WJ8 / Q96AE4
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 18948064
Gene end: 18971002
  
Corresponding Affymetrix probe sets: Gga.8479.1.S1_at (Chicken Array)   Gga.8479.1.S2_at (Chicken Array)   GgaAffx.13127.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014509
Ensembl peptide - ENSGALP00000061778
Ensembl peptide - ENSGALP00000059036
Ensembl peptide - ENSGALP00000046868
Ensembl peptide - ENSGALP00000046239
NCBI entrez gene - 424551     See in Manteia.
RefSeq - XM_015290827
RefSeq - XM_015290833
RefSeq - XM_015290831
RefSeq - XM_015290830
RefSeq - XM_015290829
RefSeq - NM_001006535
RefSeq - XM_015290828
RefSeq Peptide - NP_001006535
swissprot - E1BX03
swissprot - A0A1D5P0R0
swissprot - A0A1D5P2H3
swissprot - A0A1L1RJU6
swissprot - A0A1L1RSJ8
Ensembl - ENSGALG00000008939
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fubp1ENSDARG00000029248Danio rerio
 FUBP1ENSG00000162613Homo sapiens
 Fubp1ENSMUSG00000028034Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FUBP3 / far upstream element binding protein 3 / Q96I24*ENSGALG0000000394149


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR015096  Far upstream element-binding protein, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr