ENSG00000162613


Homo sapiens

Features
Gene ID: ENSG00000162613
  
Biological name :FUBP1
  
Synonyms : far upstream element binding protein 1 / FUBP1 / Q96AE4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p31.1
Gene start: 77944055
Gene end: 77979110
  
Corresponding Affymetrix probe sets: 203091_at (Human Genome U133 Plus 2.0 Array)   214093_s_at (Human Genome U133 Plus 2.0 Array)   214094_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359804
Ensembl peptide - ENSP00000402630
Ensembl peptide - ENSP00000294623
Ensembl peptide - ENSP00000359803
NCBI entrez gene - 8880     See in Manteia.
OMIM - 603444
RefSeq - XM_017002744
RefSeq - XM_017002739
RefSeq - XM_017002740
RefSeq - XM_017002741
RefSeq - XM_017002742
RefSeq - XM_017002743
RefSeq - NM_001303433
RefSeq - NM_003902
RefSeq - XM_011542391
RefSeq - XM_011542392
RefSeq - XM_011542393
RefSeq Peptide - NP_001290362
RefSeq Peptide - NP_003893
swissprot - E9PEB5
swissprot - Q96AE4
swissprot - C9JSZ1
Ensembl - ENSG00000162613
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fubp1ENSDARG00000029248Danio rerio
 FUBP1ENSGALG00000008939Gallus gallus
 Fubp1ENSMUSG00000028034Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KHSRP / Q92945 / KH-type splicing regulatory proteinENSG0000008824763
FUBP3 / Q96I24 / far upstream element binding protein 3ENSG0000010716450


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR015096  Far upstream element-binding protein, C-terminal
 IPR015946  K homology domain-like, alpha/beta
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0010628 positive regulation of gene expression IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding TAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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