ENSG00000107164


Homo sapiens

Features
Gene ID: ENSG00000107164
  
Biological name :FUBP3
  
Synonyms : far upstream element binding protein 3 / FUBP3 / Q96I24
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.11
Gene start: 130578965
Gene end: 130638352
  
Corresponding Affymetrix probe sets: 212824_at (Human Genome U133 Plus 2.0 Array)   239193_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000318177
NCBI entrez gene - 8939     See in Manteia.
OMIM - 603536
RefSeq - XM_017015273
RefSeq - NM_003934
RefSeq - XM_017015270
RefSeq - XM_017015271
RefSeq - XM_017015272
RefSeq - XM_005272232
RefSeq - XM_006717313
RefSeq - XM_011519172
RefSeq - XM_011519173
RefSeq - XM_011519174
RefSeq - XM_017015269
RefSeq Peptide - NP_003925
swissprot - Q96I24
swissprot - A0A024R8A7
Ensembl - ENSG00000107164
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fubp3ENSDARG00000086896Danio rerio
 FUBP3ENSGALG00000003941Gallus gallus
 Fubp3ENSMUSG00000026843Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FUBP1 / Q96AE4 / far upstream element binding protein 1ENSG0000016261357
KHSRP / Q92945 / KH-type splicing regulatory proteinENSG0000008824753


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0010628 positive regulation of gene expression IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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