ENSMUSG00000026843


Mus musculus

Features
Gene ID: ENSMUSG00000026843
  
Biological name :Fubp3
  
Synonyms : far upstream element binding protein 3 / Fubp3
  
Possible biological names infered from orthology : Q96I24
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: B
Gene start: 31572651
Gene end: 31617526
  
Corresponding Affymetrix probe sets: 10471171 (MoGene1.0st)   1433679_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117970
Ensembl peptide - ENSMUSP00000142262
Ensembl peptide - ENSMUSP00000141873
Ensembl peptide - ENSMUSP00000141386
Ensembl peptide - ENSMUSP00000141283
Ensembl peptide - ENSMUSP00000123589
Ensembl peptide - ENSMUSP00000120241
Ensembl peptide - ENSMUSP00000053474
Ensembl peptide - ENSMUSP00000109110
NCBI entrez gene - 320267     See in Manteia.
MGI - MGI:2443699
RefSeq - XM_017319018
RefSeq - NM_001033389
RefSeq - NM_001290548
RefSeq - XM_006498126
RefSeq - XM_006498127
RefSeq - XM_006498129
RefSeq - XM_006498130
RefSeq - XM_017319015
RefSeq - XM_017319016
RefSeq Peptide - NP_001028561
RefSeq Peptide - NP_001277477
swissprot - A0A0A6YX76
swissprot - A0A0A6YW42
swissprot - A0A0A6YVV5
swissprot - F6W2V3
swissprot - F7AM43
swissprot - A2AJ71
swissprot - A2AJ72
swissprot - Q3TIX6
swissprot - A0A0A6YY39
Ensembl - ENSMUSG00000026843
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fubp3ENSDARG00000086896Danio rerio
 FUBP3ENSGALG00000003941Gallus gallus
 FUBP3ENSG00000107164Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fubp1 / Q91WJ8 / Mus musculus far upstream element (FUSE) binding protein 1 (Fubp1), transcript variant 7, mRNA. / Q96AE4* / far upstream element binding protein 1*ENSMUSG0000002803455
Khsrp / Q3U0V1 / KH-type splicing regulatory protein / Q92945*ENSMUSG0000000767052


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR015096  Far upstream element-binding protein, C-terminal
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated ISO
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0010628 positive regulation of gene expression ISO
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISO
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding ISO
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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