ENSGALG00000003941


Gallus gallus

Features
Gene ID: ENSGALG00000003941
  
Biological name :FUBP3
  
Synonyms : far upstream element binding protein 3 / FUBP3
  
Possible biological names infered from orthology : Q96I24
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 6376557
Gene end: 6412680
  
Corresponding Affymetrix probe sets: Gga.12054.2.S1_s_at (Chicken Array)   Gga.15985.1.S1_at (Chicken Array)   GgaAffx.2455.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057240
Ensembl peptide - ENSGALP00000038764
NCBI entrez gene - 417184     See in Manteia.
RefSeq - XM_015279461
RefSeq - NM_001006199
RefSeq - XM_015279457
RefSeq - XM_015279458
RefSeq - XM_015279459
RefSeq - XM_015279453
RefSeq - XM_015279454
RefSeq - XM_015279455
RefSeq - XM_015279456
RefSeq Peptide - NP_001006199
swissprot - Q5ZM76
swissprot - A0A1D5PWA9
Ensembl - ENSGALG00000003941
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fubp3ENSDARG00000086896Danio rerio
 FUBP3ENSG00000107164Homo sapiens
 Fubp3ENSMUSG00000026843Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FUBP1 / far upstream element-binding protein 1 / Q91WJ8* / Q96AE4* / Mus musculus far upstream element (FUSE) binding protein 1 (Fubp1), transcript variant 7, mRNA.*ENSGALG0000000893957


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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