ENSGALG00000009032


Gallus gallus

Features
Gene ID: ENSGALG00000009032
  
Biological name :PIF1
  
Synonyms : PIF1 / PIF1 5-to-3 DNA helicase
  
Possible biological names infered from orthology : Mus musculus PIF1 5-to-3 DNA helicase (Pif1), transcript variant 2, mRNA. / Q80SX8 / Q9H611
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 19675023
Gene end: 19681422
  
Corresponding Affymetrix probe sets: Gga.16531.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064544
Ensembl peptide - ENSGALP00000014682
NCBI entrez gene - 429092     See in Manteia.
RefSeq - XM_426648
RefSeq - XM_015291325
swissprot - F1NHS6
swissprot - A0A1L1S0B3
Ensembl - ENSGALG00000009032
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pif1ENSDARG00000020289Danio rerio
 PIF1ENSG00000140451Homo sapiens
 Pif1ENSMUSG00000041064Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003840  DNA helicase
 IPR010285  DNA helicase Pif1-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000002 mitochondrial genome maintenance IBA
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0006260 DNA replication IBA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0032204 regulation of telomere maintenance IEA
 biological_processGO:0032211 negative regulation of telomere maintenance via telomerase IEA
 biological_processGO:0032508 DNA duplex unwinding IBA
 biological_processGO:0044806 G-quadruplex DNA unwinding IBA
 biological_processGO:0051974 negative regulation of telomerase activity IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005657 replication fork IBA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003678 DNA helicase activity IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0010521 telomerase inhibitor activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0017116 single-stranded DNA-dependent ATP-dependent DNA helicase activity IEA
 molecular_functionGO:0033682 ATP-dependent 5"-3" DNA/RNA helicase activity IEA
 molecular_functionGO:0042162 telomeric DNA binding IEA
 molecular_functionGO:0043141 ATP-dependent 5"-3" DNA helicase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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