ENSGALG00000009061


Gallus gallus

Features
Gene ID: ENSGALG00000009061
  
Biological name :ACTL6A
  
Synonyms : actin like 6A / ACTL6A
  
Possible biological names infered from orthology : O96019 / Q9Z2N8
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 17487621
Gene end: 17496460
  
Corresponding Affymetrix probe sets: GgaAffx.20758.1.S1_s_at (Chicken Array)   GgaAffx.5725.1.S1_at (Chicken Array)   GgaAffx.5725.1.S1_s_at (Chicken Array)   GgaAffx.5725.2.S1_at (Chicken Array)   GgaAffx.5725.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000038778
NCBI entrez gene - 424975     See in Manteia.
RefSeq - XM_422784
swissprot - E1BR36
Ensembl - ENSGALG00000009061
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 actl6aENSDARG00000070828Danio rerio
 ACTL6AENSG00000136518Homo sapiens
 Actl6aENSMUSG00000027671Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004000  Actin family
 IPR004001  Actin, conserved site
 IPR029912  Actin-like protein 6A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003407 neural retina development IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0043044 ATP-dependent chromatin remodeling IEA
 biological_processGO:0043967 histone H4 acetylation IEA
 biological_processGO:0043968 histone H2A acetylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016514 SWI/SNF complex IEA
 cellular_componentGO:0031011 Ino80 complex IEA
 cellular_componentGO:0035267 NuA4 histone acetyltransferase complex IEA
 cellular_componentGO:0071564 npBAF complex IEA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
UCH proteinases
DNA Damage Recognition in GG-NER
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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