ENSGALG00000009130


Gallus gallus

Features
Gene ID: ENSGALG00000009130
  
Biological name :GPCPD1
  
Synonyms : Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. / GPCPD1
  
Possible biological names infered from orthology : glycerophosphocholine phosphodiesterase 1 / Q8C0L9 / Q9NPB8
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 16773170
Gene end: 16806055
  
Corresponding Affymetrix probe sets: Gga.4689.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014847
NCBI entrez gene - 421311     See in Manteia.
RefSeq - XM_419376
RefSeq - NM_001318987
RefSeq - XM_015283920
RefSeq - XM_015283921
RefSeq - XM_004935284
RefSeq - XM_004935285
RefSeq - XM_004935286
RefSeq Peptide - NP_001305916
swissprot - E1BYP8
Ensembl - ENSGALG00000009130
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpcpd1ENSDARG00000016011Danio rerio
 GPCPD1ENSG00000125772Homo sapiens
 Gpcpd1ENSMUSG00000027346Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002044  Carbohydrate binding module family 20
 IPR013783  Immunoglobulin-like fold
 IPR013784  Carbohydrate-binding-like fold
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0030643 cellular phosphate ion homeostasis IBA
 biological_processGO:0046475 glycerophospholipid catabolic process IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IBA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0047389 glycerophosphocholine phosphodiesterase activity IBA
 molecular_functionGO:2001070 starch binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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