ENSGALG00000009257


Gallus gallus

Features
Gene ID: ENSGALG00000009257
  
Biological name :PLRG1
  
Synonyms : pleiotropic regulator 1 / PLRG1
  
Possible biological names infered from orthology : O43660 / Q922V4
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 20456316
Gene end: 20468731
  
Corresponding Affymetrix probe sets: Gga.9982.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015051
Ensembl peptide - ENSGALP00000059885
NCBI entrez gene - 422401     See in Manteia.
RefSeq - XM_420368
swissprot - A0A1L1RM96
swissprot - E1BVN5
Ensembl - ENSGALG00000009257
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 plrg1ENSDARG00000037283Danio rerio
 PLRG1ENSG00000171566Homo sapiens
 Plrg1ENSMUSG00000027998Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STRN / striatin / O43815* / O55106*ENSGALG0000001058021
STRN3 / striatin 3 / Q13033* / Q9ERG2* / striatin, calmodulin binding protein 3*ENSGALG0000004046421


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0034504 protein localization to nucleus IEA
 biological_processGO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEA
 cellular_componentGO:0000974 Prp19 complex IBA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005662 DNA replication factor A complex IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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