ENSGALG00000009372


Gallus gallus

Features
Gene ID: ENSGALG00000009372
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : PHC3 / polyhomeotic homolog 3 / Polyhomeotic-like protein 3 / Q8CHP6 / Q8NDX5
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 19917574
Gene end: 19940363
  
Corresponding Affymetrix probe sets: GgaAffx.5916.1.S1_at (Chicken Array)   GgaAffx.5916.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015251
NCBI entrez gene - 429159     See in Manteia.
RefSeq - XM_004943491
RefSeq - XM_004943492
RefSeq - XM_004943494
RefSeq - XM_015291721
RefSeq - XM_015291722
RefSeq - XM_426714
RefSeq - XM_004943490
swissprot - F1P0K3
Ensembl - ENSGALG00000009372
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHC3ENSG00000173889Homo sapiens
 Phc3ENSMUSG00000037652Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHC1 / polyhomeotic-like protein 1 / P78364* / polyhomeotic homolog 1* / Mus musculus polyhomeotic 1 (Phc1), transcript variant 5, mRNA.*ENSGALG0000001426330
SAMD11 / sterile alpha motif domain-containing protein 11 / Q1RNF8* / Q96NU1* / sterile alpha motif domain containing 11*ENSGALG0000003445310
SAMD7 / sterile alpha motif domain containing 7 / Q7Z3H4* / Q8C8Y5* / Sterile alpha motif domain-containing protein 7 *ENSGALG000000093838
PHC2* / Q8IXK0* / Q9QWH1* / polyhomeotic homolog 2* / Polyhomeotic-like protein 2 *ENSGALG000000395327


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR012313  Zinc finger, FCS-type
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
Oxidative Stress Induced Senescence
SUMOylation of DNA damage response and repair proteins
SUMOylation of transcription cofactors
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of PTEN gene transcription
Transcriptional Regulation by E2F6


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000041267 BMI1 / Q5SDR3 / Polycomb complex protein BMI-1 / P25916* / P35226* / COMMD3-BMI1* / COMMD3-BMI1 readthrough* / BMI1 proto-oncogene, polycomb ring finger*  / complex
 ENSGALG00000018815 PCGF2 / P23798* / P35227* / polycomb group ring finger 2* / Polycomb group RING finger protein 2 *  / complex






 

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