ENSGALG00000009674


Gallus gallus

Features
Gene ID: ENSGALG00000009674
  
Biological name :CLCN3
  
Synonyms : chloride voltage-gated channel 3 / CLCN3
  
Possible biological names infered from orthology : H(+)/Cl(-) exchange transporter 3 / P51790 / P51791
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 25540500
Gene end: 25584149
  
Corresponding Affymetrix probe sets: Gga.5911.1.S1_at (Chicken Array)   Gga.5911.2.S1_a_at (Chicken Array)   GgaAffx.23007.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015730
Ensembl peptide - ENSGALP00000052747
Ensembl peptide - ENSGALP00000051897
Ensembl peptide - ENSGALP00000046772
NCBI entrez gene - 422432     See in Manteia.
RefSeq - XM_420400
RefSeq - XM_004940930
RefSeq - XM_004940931
RefSeq - XM_015285384
RefSeq - XM_015285385
RefSeq - XM_004940929
swissprot - A0A1D5PIW1
swissprot - A0A1D5PGH5
swissprot - A0A1D5P277
swissprot - E1C9F3
Ensembl - ENSGALG00000009674
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clcn3ENSDARG00000003269Danio rerio
 CLCN3ENSG00000109572Homo sapiens
 Clcn3ENSMUSG00000004319Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLCN5 / chloride voltage-gated channel 5 / P51795* / Q9WVD4* / H(+)/Cl(-) exchange transporter 5 *ENSGALG0000000723468
CLCN4 / chloride voltage-gated channel 4 / P51793* / Q61418* / Mus musculus chloride channel, voltage-sensitive 4 (Clcn4), transcript variant 7, mRNA.*ENSGALG0000001660766
CLCN7 / H(+)/Cl(-) exchange transporter 7 / O70496* / P51798* / chloride voltage-gated channel 7*ENSGALG0000003082625
CLCN6 / chloride voltage-gated channel 6 / O35454* / P51797* / Chloride transport protein 6 *ENSGALG0000000459024
CLCN2 / chloride voltage-gated channel 2 / P51788* / Q9R0A1* / Chloride channel protein 2 *ENSGALG0000002580421
ENSGALG0000001523421
CLCN1 / chloride voltage-gated channel 1 / P35523* / Q64347* / Chloride channel protein 1 *ENSGALG0000001469520
Q9WUB7* / CLCNKB* / P51800* / P51801* / Q9WUB6* / CLCNKA* / Chloride channel protein ClC-Kb * / Chloride channel protein ClC-Ka * / chloride voltage-gated channel Ka* / chloride voltage-gat...ENSGALG0000000371317


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR001807  Chloride channel, voltage gated
 IPR002245  Chloride channel ClC-3
 IPR014743  Chloride channel, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0045794 negative regulation of cell volume IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0012506 vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030141 secretory granule IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042581 specific granule IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0005247 voltage-gated chloride channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA
 molecular_functionGO:0030165 PDZ domain binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0072320 volume-sensitive chloride channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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