ENSGALG00000004590


Gallus gallus

Features
Gene ID: ENSGALG00000004590
  
Biological name :CLCN6
  
Synonyms : chloride voltage-gated channel 6 / CLCN6
  
Possible biological names infered from orthology : Chloride transport protein 6 / O35454 / P51797
  
Species: Gallus gallus
  
Chr. number: 21
Strand: -1
Band:
Gene start: 5584913
Gene end: 5603825
  
Corresponding Affymetrix probe sets: Gga.15122.1.S1_at (Chicken Array)   GgaAffx.2837.1.S1_at (Chicken Array)   GgaAffx.2837.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007291
NCBI entrez gene - 419488     See in Manteia.
RefSeq - NM_001285979
RefSeq Peptide - NP_001272908
swissprot - E1BZI1
Ensembl - ENSGALG00000004590
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clcn6ENSDARG00000032577Danio rerio
 CLCN6ENSG00000011021Homo sapiens
 Clcn6ENSMUSG00000029016Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLCN7 / H(+)/Cl(-) exchange transporter 7 / O70496* / P51798* / chloride voltage-gated channel 7*ENSGALG0000003082639
ENSGALG0000001523428
CLCN5 / chloride voltage-gated channel 5 / P51795* / Q9WVD4* / H(+)/Cl(-) exchange transporter 5 *ENSGALG0000000723424
CLCN3 / chloride voltage-gated channel 3 / P51790* / P51791* / H(+)/Cl(-) exchange transporter 3 *ENSGALG0000000967424
CLCN4 / chloride voltage-gated channel 4 / P51793* / Q61418* / Mus musculus chloride channel, voltage-sensitive 4 (Clcn4), transcript variant 7, mRNA.*ENSGALG0000001660723
CLCN2 / chloride voltage-gated channel 2 / P51788* / Q9R0A1* / Chloride channel protein 2 *ENSGALG0000002580420
CLCN1 / chloride voltage-gated channel 1 / P35523* / Q64347* / Chloride channel protein 1 *ENSGALG0000001469519
Q9WUB7* / CLCNKB* / P51800* / P51801* / Q9WUB6* / CLCNKA* / Chloride channel protein ClC-Kb * / Chloride channel protein ClC-Ka * / chloride voltage-gated channel Ka* / chloride voltage-gat...ENSGALG0000000371316


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR001807  Chloride channel, voltage gated
 IPR002248  Chloride channel ClC-6
 IPR014743  Chloride channel, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005247 voltage-gated chloride channel activity IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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