ENSDARG00000032577


Danio rerio

Features
Gene ID: ENSDARG00000032577
  
Biological name :clcn6
  
Synonyms : chloride channel 6 / clcn6
  
Possible biological names infered from orthology : Chloride transport protein 6 / chloride voltage-gated channel 6 / O35454 / P51797
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 48629495
Gene end: 48669127
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000047133
NCBI entrez gene - 568122     See in Manteia.
RefSeq - XM_009304277
swissprot - E7F798
ZFIN ID - ZDB-GENE-030131-2056
Ensembl - ENSDARG00000032577
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLCN6ENSGALG00000004590Gallus gallus
 CLCN6ENSG00000011021Homo sapiens
 Clcn6ENSMUSG00000029016Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clcn7 / chloride channel 7 / O70496* / P51798* / chloride voltage-gated channel 7* / H(+)/Cl(-) exchange transporter 7 *ENSDARG0000001955638
clcn5a / chloride channel, voltage-sensitive 5a / CLCN5* / P51795* / Q9WVD4* / chloride voltage-gated channel 5* / H(+)/Cl(-) exchange transporter 5 *ENSDARG0000001969324
clcn3 / chloride channel 3 / P51790* / P51791* / chloride voltage-gated channel 3* / H(+)/Cl(-) exchange transporter 3 *ENSDARG0000000326924
clcn5b / chloride channel, voltage-sensitive 5b / CLCN5* / P51795* / Q9WVD4* / chloride voltage-gated channel 5* / H(+)/Cl(-) exchange transporter 5 *ENSDARG0000002246624
clcn4 / chloride channel, voltage-sensitive 4 / P51793* / chloride voltage-gated channel 4*ENSDARG0000003580823
clcn1a / chloride channel, voltage-sensitive 1a / CLCN1* / Q64347* / P35523* / Chloride channel protein 1 * / chloride voltage-gated channel 1*ENSDARG0000006208420
clcn1b / chloride channel, voltage-sensitive 1b / CLCN1* / Q64347* / P35523* / Chloride channel protein 1 * / chloride voltage-gated channel 1*ENSDARG0000001226919
clcn2a / chloride channel, voltage-sensitive 2a / CLCN2* / Q9R0A1* / P51788* / Chloride channel protein 2 * / chloride voltage-gated channel 2*ENSDARG0000006242719
clcn2c / chloride channel 2c / CLCN2* / P51788* / Q9R0A1* / Chloride channel protein 2 * / chloride voltage-gated channel 2*ENSDARG0000006043917
clcnk / chloride channel K / P51801* / CLCNKA* / CLCNKB* / P51800* / chloride voltage-gated channel Ka* / chloride voltage-gated channel Kb*ENSDARG0000002256015


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR001807  Chloride channel, voltage gated
 IPR002248  Chloride channel ClC-6
 IPR014743  Chloride channel, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005247 voltage-gated chloride channel activity IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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