ENSDARG00000019556


Danio rerio

Features
Gene ID: ENSDARG00000019556
  
Biological name :clcn7
  
Synonyms : chloride channel 7 / clcn7
  
Possible biological names infered from orthology : chloride voltage-gated channel 7 / H(+)/Cl(-) exchange transporter 7 / O70496 / P51798
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 27664864
Gene end: 27709312
  
Corresponding Affymetrix probe sets: Dr.17506.1.A1_at (Zebrafish Array)   NM_001077537_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000155345
Ensembl peptide - ENSDARP00000105498
Ensembl peptide - ENSDARP00000094436
NCBI entrez gene - 553351     See in Manteia.
RefSeq - NM_001077537
RefSeq - XM_005163946
RefSeq Peptide - NP_001071005
swissprot - F1QNV1
swissprot - F1QNP3
ZFIN ID - ZDB-GENE-061103-196
Ensembl - ENSDARG00000019556
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLCN7ENSGALG00000030826Gallus gallus
 CLCN7ENSG00000103249Homo sapiens
 Clcn7ENSMUSG00000036636Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clcn6 / chloride channel 6 / O35454* / P51797* / Chloride transport protein 6 * / chloride voltage-gated channel 6*ENSDARG0000003257742
clcn3 / chloride channel 3 / P51790* / P51791* / chloride voltage-gated channel 3* / H(+)/Cl(-) exchange transporter 3 *ENSDARG0000000326928
clcn5a / chloride channel, voltage-sensitive 5a / CLCN5* / P51795* / Q9WVD4* / chloride voltage-gated channel 5* / H(+)/Cl(-) exchange transporter 5 *ENSDARG0000001969327
clcn5b / chloride channel, voltage-sensitive 5b / CLCN5* / P51795* / Q9WVD4* / chloride voltage-gated channel 5* / H(+)/Cl(-) exchange transporter 5 *ENSDARG0000002246627
clcn4 / chloride channel, voltage-sensitive 4 / P51793* / chloride voltage-gated channel 4*ENSDARG0000003580826
clcn1a / chloride channel, voltage-sensitive 1a / CLCN1* / Q64347* / P35523* / Chloride channel protein 1 * / chloride voltage-gated channel 1*ENSDARG0000006208422
clcn2a / chloride channel, voltage-sensitive 2a / CLCN2* / Q9R0A1* / P51788* / Chloride channel protein 2 * / chloride voltage-gated channel 2*ENSDARG0000006242722
clcn1b / chloride channel, voltage-sensitive 1b / CLCN1* / Q64347* / P35523* / Chloride channel protein 1 * / chloride voltage-gated channel 1*ENSDARG0000001226922
clcn2c / chloride channel 2c / CLCN2* / P51788* / Q9R0A1* / Chloride channel protein 2 * / chloride voltage-gated channel 2*ENSDARG0000006043919
clcnk / chloride channel K / P51801* / CLCNKA* / CLCNKB* / P51800* / chloride voltage-gated channel Ka* / chloride voltage-gated channel Kb*ENSDARG0000002256018


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR001807  Chloride channel, voltage gated
 IPR002249  Chloride channel ClC-7
 IPR014743  Chloride channel, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005247 voltage-gated chloride channel activity IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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