ENSG00000103249


Homo sapiens

Features
Gene ID: ENSG00000103249
  
Biological name :CLCN7
  
Synonyms : chloride voltage-gated channel 7 / CLCN7 / P51798
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 1444934
Gene end: 1475580
  
Corresponding Affymetrix probe sets: 209235_at (Human Genome U133 Plus 2.0 Array)   221961_at (Human Genome U133 Plus 2.0 Array)   38069_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000372193
Ensembl peptide - ENSP00000454845
Ensembl peptide - ENSP00000461009
Ensembl peptide - ENSP00000262318
Ensembl peptide - ENSP00000410907
NCBI entrez gene - 1186     See in Manteia.
OMIM - 602727
RefSeq - XM_011522354
RefSeq - NM_001114331
RefSeq - NM_001287
RefSeq Peptide - NP_001107803
RefSeq Peptide - NP_001278
swissprot - P51798
swissprot - H0Y2M6
swissprot - H3BNG8
swissprot - I3L470
Ensembl - ENSG00000103249
  
Related genetic diseases (OMIM): 166600 - Osteopetrosis, autosomal dominant 2, 166600
  611490 - Osteopetrosis, autosomal recessive 4, 611490
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clcn7ENSDARG00000019556Danio rerio
 CLCN7ENSGALG00000030826Gallus gallus
 Clcn7ENSMUSG00000036636Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLCN6 / P51797 / chloride voltage-gated channel 6ENSG0000001102142
CLCN4 / P51793 / chloride voltage-gated channel 4ENSG0000007346427
CLCN5 / P51795 / chloride voltage-gated channel 5ENSG0000017136527
CLCN3 / P51790 / chloride voltage-gated channel 3ENSG0000010957227
CLCN1 / P35523 / chloride voltage-gated channel 1ENSG0000018803722
CLCN2 / P51788 / chloride voltage-gated channel 2ENSG0000011485922
CLCNKA / P51800 / chloride voltage-gated channel KaENSG0000018651019
CLCNKB / P51801 / chloride voltage-gated channel KbENSG0000018490819


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR001807  Chloride channel, voltage gated
 IPR002249  Chloride channel ClC-7
 IPR014743  Chloride channel, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0009268 response to pH IEA
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005247 voltage-gated chloride channel activity IBA
 molecular_functionGO:0005254 chloride channel activity TAS
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015297 antiporter activity IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000238 Hydrocephalus 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000365 Hearing loss 
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 HP:0000388 Otitis media 
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 HP:0000505 Impaired vision 
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 HP:0000572 Visual loss 
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000649 Abnormality of vision evoked potentials 
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 HP:0000670 Carious teeth 
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000772 Abnormality of the ribs 
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 HP:0000774 Narrow chest 
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0000978 Ecchymoses 
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 HP:0000980 Pallor 
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 HP:0001163 Abnormality of the metacarpal bones 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001363 Craniosynostosis "Craniosynostosis refers to the premature closure of the cranial sutures. Primary craniosynostosis refers to the closure of one or more sutures due to abnormalities in skull development, and secondary craniosynostosis results from failure of brain growth." [HPO:curators]
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 HP:0001373 Joint dislocation "Displacement or malalignment of joints." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001433 Hepatosplenomegaly 
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 HP:0001510 Growth retardation 
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 HP:0001641 Abnormality of the pulmonary valve "An abnormality of the `pulmonary valve` (FMA:7246)." [HPO:probinson]
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001881 Abnormality of leukocytes 
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 HP:0001903 Anemia 
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 HP:0001923 Reticulocytosis 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002092 Pulmonary hypertension 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002148 Hypophosphatemia "A lower than normal level of blood phosphate." [HPO:curators]
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002257 Chronic rhinitis 
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 HP:0002644 Abnormality of the pelvis "An abnormality of the bony pelvis (pelvic girdle); which is a ring of bones connecting the vertebral column to the femurs." [HPO:curators]
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 HP:0002653 Bone pain 
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 HP:0002716 Lymphadenopathy 
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002758 Osteoarthritis 
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 HP:0002857 Genu valgum 
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 HP:0002901 Hypocalcemia "A level of blood calcium that is lower than normal." [HPO:curators]
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 HP:0003084 Fractures of the long bones "An increased tendency to fractures of the long bones (Mainly, the femur, tibia, fibula,humerus, radius, and ulna)." [HPO:curators]
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 HP:0003148 Elevated serum acid phosphatase 
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 HP:0003621 Juvenile onset 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004349 Reduced bone mineral density "A reduction of bone mineral density, that is, of the amount of matter per cubic centimeter of bones." [HPO:curators]
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 HP:0004370 Abnormality of temperature regulation 
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 HP:0004415 Pulmonary artery stenosis 
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 HP:0005106 Abnormality of the vertebral endplates "Any abnormality of the vertebral end plates, which are the top and bottom portions of the vertebral bodies that interface with the vertebral discs." [HPO:curators]
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 HP:0005528 Bone marrow hypoplasia 
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 HP:0005789 Osteosclerosis, diffuse symmetrical 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0006323 Premature deciduous tooth loss 
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 HP:0006487 Bowing of the long bones 
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 HP:0006824 Cranial nerve paralysis 
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 HP:0007209 Facial paralysis due to cranial nerve VII compression "Facial nerve paralysis (facial palsy) caused by compression (with ensuing loss of function) of the facial nerve (i.e., the seventh cranial nerve)." [HPO:curators]
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 HP:0007626 Mandibular osteomyelitis 
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 HP:0007807 Optic nerve compression 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008843 Hip osteoarthritis 
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0010543 Opsoclonus "Spontaneous, non-rhythmic, multi-directional, chaotic movements of the eyes, giving the appearance of agitation. There may be bursts of conjugate movement of the eyes in varying directions and of varying amplitude." [HPO:curators]
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0010719 Abnormality of hair texture "An abnormality of the texture of the `hair` (FMA:53667)." [HPO:probinson]
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 HP:0010885 Aseptic necrosis "A disease where there is cellular death (necrosis) of bone components due to interruption of the blood supply." [HPO:sdoelken]
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 HP:0011002 Osteopetrosis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000081087 OSTM1 / Q86WC4 / osteopetrosis associated transmembrane protein 1  / complex






 

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