ENSG00000184908


Homo sapiens

Features
Gene ID: ENSG00000184908
  
Biological name :CLCNKB
  
Synonyms : chloride voltage-gated channel Kb / CLCNKB / P51801
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p36.13
Gene start: 16043736
Gene end: 16057308
  
Corresponding Affymetrix probe sets: 1554748_at (Human Genome U133 Plus 2.0 Array)   1554749_s_at (Human Genome U133 Plus 2.0 Array)   205985_x_at (Human Genome U133 Plus 2.0 Array)   207047_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364831
Ensembl peptide - ENSP00000483866
Ensembl peptide - ENSP00000389344
Ensembl peptide - ENSP00000364819
NCBI entrez gene - 1188     See in Manteia.
OMIM - 602023
RefSeq - NM_000085
RefSeq - NM_001165945
RefSeq Peptide - NP_001159417
RefSeq Peptide - NP_000076
swissprot - Q5T5Q6
swissprot - P51801
swissprot - A0A087X136
Ensembl - ENSG00000184908
  
Related genetic diseases (OMIM): 607364 - Bartter syndrome, type 3, 607364
  613090 - Bartter syndrome, type 4b, digenic, 613090
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clcnkENSDARG00000022560Danio rerio
 ENSGALG00000003713Gallus gallus
 ClcnkaENSMUSG00000033770Mus musculus
 ClcnkbENSMUSG00000006216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLCNKA / P51800 / chloride voltage-gated channel KaENSG0000018651091
CLCN2 / P51788 / chloride voltage-gated channel 2ENSG0000011485944
CLCN1 / P35523 / chloride voltage-gated channel 1ENSG0000018803741
CLCN5 / P51795 / chloride voltage-gated channel 5ENSG0000017136523
CLCN4 / P51793 / chloride voltage-gated channel 4ENSG0000007346423
CLCN7 / P51798 / chloride voltage-gated channel 7ENSG0000010324923
CLCN3 / P51790 / chloride voltage-gated channel 3ENSG0000010957222
CLCN6 / P51797 / chloride voltage-gated channel 6ENSG0000001102122


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR001807  Chloride channel, voltage gated
 IPR002250  Chloride channel ClC-K
 IPR013785  Aldolase-type TIM barrel
 IPR014743  Chloride channel, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007588 excretion TAS
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005247 voltage-gated chloride channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000103 Polyuria 
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 HP:0000127 Renal salt wasting 
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 HP:0000128 Renal potassium wasting 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000591 Abnormality of the sclera 
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 HP:0000610 Abnormality of the choroid 
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 HP:0000841 Hyperactive renin-angiotensin system 
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 HP:0000848 Increased plasma renin 
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 HP:0000859 Increased plasma aldosterone 
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001508 Failure to thrive 
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 HP:0001561 Polyhydramnios 
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 HP:0001563 Fetal polyuria 
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 HP:0001622 Premature birth 
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 HP:0001944 Dehydration 
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 HP:0001960 Hypokalemic metabolic alkalosis 
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 HP:0002615 Hypotension 
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 HP:0002900 Hypokalemia 
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 HP:0002902 Hyponatremia 
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 HP:0002914 Increased urinary chloride 
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 HP:0003081 Increased urinary potassium 
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 HP:0003113 Hypochloremia 
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 HP:0003127 Hypocalciuria 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0004909 hypokalemic hypochloremic metabolic alkalosis 
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 HP:0005579 Impaired reabsorption of chloride 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0012213 Decreased glomerular filtration rate "An abnormal reduction in the volume of water filtered out of plasma through glomerular capillary walls into Bowman s capsules per unit of time." [HP:probinson]
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 HP:0012605 Hypernatriuria "An increased concentration of `sodium(1+)` (CHEBI:29101) in the `urine` (FMA:12274)." [Eurenomics:ewuehl]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000162399 BSND / Q8WZ55 / barttin CLCNK type accessory beta subunit  / complex






 

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