ENSGALG00000009692


Gallus gallus

Features
Gene ID: ENSGALG00000009692
  
Biological name :SH3RF1
  
Synonyms : SH3 domain containing ring finger 1 / SH3RF1
  
Possible biological names infered from orthology : Q7Z6J0
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 25668584
Gene end: 25740316
  
Corresponding Affymetrix probe sets: Gga.17888.1.S1_s_at (Chicken Array)   GgaAffx.23016.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015758
NCBI entrez gene - 422434     See in Manteia.
RefSeq - XM_015285372
RefSeq - XM_015285373
RefSeq - XM_420402
swissprot - F1NYR2
Ensembl - ENSGALG00000009692
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sh3rf1ENSDARG00000070470Danio rerio
 Q7Z6J0ENSG00000154447Homo sapiens
 Sh3rf1ENSMUSG00000031642Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SH3RF3 / SH3 domain containing ring finger 3 / Q8C120* / Q8TEJ3* / SH3 domain-containing RING finger protein 3 *ENSGALG0000001681033
SH3RF2 / SH3 domain containing ring finger 2 / Q8BZT2* / Q8TEC5* / Putative E3 ubiquitin-protein ligase SH3RF2 *ENSGALG0000004390425
SORBS2 / sorbin and SH3 domain containing 2 / O94875* / Q3UTJ2*ENSGALG0000001342711
SORBS1 / sorbin and SH3 domain containing 1 / Q9BX66*ENSGALG0000003872211
SH3D19 / SH3 domain containing 19 / Q5HYK7* / Q91X43* / SH3 domain-containing protein 19 *ENSGALG000000100819


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR028502  E3 ubiquitin-protein ligase SH3RF1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
 biological_processGO:0046328 regulation of JNK cascade IEA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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