ENSMUSG00000031642


Mus musculus

Features
Gene ID: ENSMUSG00000031642
  
Biological name :Sh3rf1
  
Synonyms : SH3 domain containing ring finger 1 / Sh3rf1
  
Possible biological names infered from orthology : Q7Z6J0
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: B3.1
Gene start: 61223872
Gene end: 61396071
  
Corresponding Affymetrix probe sets: 10571958 (MoGene1.0st)   1421270_at (Mouse Genome 430 2.0 Array)   1421271_at (Mouse Genome 430 2.0 Array)   1442402_at (Mouse Genome 430 2.0 Array)   1445178_at (Mouse Genome 430 2.0 Array)   1455149_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034060
Ensembl peptide - ENSMUSP00000148118
NCBI entrez gene - 59009     See in Manteia.
MGI - MGI:1913066
RefSeq - NM_021506
RefSeq - XM_011242231
RefSeq Peptide - NP_067481
swissprot - E9QQ33
swissprot - A0A1B0GSY0
Ensembl - ENSMUSG00000031642
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sh3rf1ENSDARG00000070470Danio rerio
 SH3RF1ENSGALG00000009692Gallus gallus
 Q7Z6J0ENSG00000154447Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8C120 / Sh3rf3 / SH3 domain-containing RING finger protein 3 / Q8TEJ3* / SH3 domain containing ring finger 3*ENSMUSG0000003799047
Q8BZT2 / Sh3rf2 / Putative E3 ubiquitin-protein ligase SH3RF2 / Q8TEC5* / SH3 domain containing ring finger 2*ENSMUSG0000005771927
Q3UTJ2 / Sorbs2 / sorbin and SH3 domain containing 2 / O94875*ENSMUSG0000003162612
Q9R1Z8 / Sorbs3 / sorbin and SH3 domain containing 3 / O60504*ENSMUSG0000002209112
Sorbs1 / sorbin and SH3 domain containing 1 / Q9BX66*ENSMUSG0000002500610
Q91X43 / Sh3d19 / SH3 domain-containing protein 19 / Q5HYK7* / SH3 domain containing 19*ENSMUSG000000280829


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR028502  E3 ubiquitin-protein ligase SH3RF1
 IPR035795  E3 ubiquitin-protein ligase SH3RF1, second SH3 domain
 IPR035816  SH3RF1/SH3RF3, fourth SH3 domain
 IPR036028  SH3-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
 biological_processGO:0046328 regulation of JNK cascade IEA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr