ENSMUSG00000028082


Mus musculus

Features
Gene ID: ENSMUSG00000028082
  
Biological name :Sh3d19
  
Synonyms : Q91X43 / Sh3d19 / SH3 domain-containing protein 19
  
Possible biological names infered from orthology : Q5HYK7 / SH3 domain containing 19
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F1
Gene start: 85971109
Gene end: 86130526
  
Corresponding Affymetrix probe sets: 10492864 (MoGene1.0st)   1418460_at (Mouse Genome 430 2.0 Array)   1418461_at (Mouse Genome 430 2.0 Array)   1427574_s_at (Mouse Genome 430 2.0 Array)   1449084_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000103291
Ensembl peptide - ENSMUSP00000138320
NCBI entrez gene - 27059     See in Manteia.
MGI - MGI:1350923
RefSeq - XM_011240136
RefSeq - NM_001082414
RefSeq - XM_006501550
RefSeq - XM_011240135
RefSeq - XM_006501546
RefSeq - XM_006501547
RefSeq - XM_006501548
RefSeq Peptide - NP_001075883
swissprot - Q91X43
Ensembl - ENSMUSG00000028082
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sh3d19ENSDARG00000088202Danio rerio
 SH3D19ENSGALG00000010081Gallus gallus
 Q5HYK7ENSG00000109686Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3UTJ2 / Sorbs2 / sorbin and SH3 domain containing 2 / O94875*ENSMUSG0000003162616
Sorbs1 / sorbin and SH3 domain containing 1 / Q9BX66*ENSMUSG0000002500614
Q9R1Z8 / Sorbs3 / sorbin and SH3 domain containing 3 / O60504*ENSMUSG0000002209112
Q8C120 / Sh3rf3 / SH3 domain-containing RING finger protein 3 / Q8TEJ3* / SH3 domain containing ring finger 3*ENSMUSG0000003799011
Sh3rf1 / SH3 domain containing ring finger 1 / Q7Z6J0*ENSMUSG0000003164211
Q8BZT2 / Sh3rf2 / Putative E3 ubiquitin-protein ligase SH3RF2 / Q8TEC5* / SH3 domain containing ring finger 2*ENSMUSG000000577198


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR035834  SH3 domain-containing protein 19, SH3 domain 1
 IPR035835  SH3 domain-containing protein 19, SH3 domain 3
 IPR036028  SH3-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization ISO
 biological_processGO:0022604 regulation of cell morphogenesis ISO
 biological_processGO:0051044 positive regulation of membrane protein ectodomain proteolysis ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005886 plasma membrane ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0070064 proline-rich region binding ISO


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000028580 Pum1 / Q80U78 / pumilio RNA-binding family member 1 / Q14671*  / complex
 ENSMUSG00000024661 Fth1 / P09528 / Ferritin heavy chain Ferritin heavy chain, N-terminally processed / P02794* / ferritin heavy chain 1*  / complex
 ENSMUSG00000050708 Ftl1 / FTL* / P02792* / ferritin light chain*  / complex
 ENSMUSG00000006169 Clint1 / Mus musculus clathrin interactor 1 (Clint1), transcript variant 2, mRNA. / Q14677* / clathrin interactor 1*  / complex






 

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