ENSMUSG00000006169


Mus musculus

Features
Gene ID: ENSMUSG00000006169
  
Biological name :Clint1
  
Synonyms : Clint1 / Mus musculus clathrin interactor 1 (Clint1), transcript variant 2, mRNA.
  
Possible biological names infered from orthology : clathrin interactor 1 / Q14677
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.1
Gene start: 45852051
Gene end: 45910625
  
Corresponding Affymetrix probe sets: 10375382 (MoGene1.0st)   1452152_at (Mouse Genome 430 2.0 Array)   1457925_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000104883
Ensembl peptide - ENSMUSP00000104884
NCBI entrez gene - 216705     See in Manteia.
MGI - MGI:2144243
RefSeq - XM_006532840
RefSeq - NM_001045520
RefSeq - NM_001346760
RefSeq - XM_006532838
RefSeq - XM_006532839
RefSeq Peptide - NP_001038985
RefSeq Peptide - NP_001333689
swissprot - Q5SUH7
swissprot - Q5SUH6
Ensembl - ENSMUSG00000006169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clint1aENSDARG00000025535Danio rerio
 clint1bENSDARG00000089914Danio rerio
 CLINT1ENSGALG00000003702Gallus gallus
 CLINT1ENSG00000113282Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Epn3 / Q91W69 / Epsin-3 / Q9H201*ENSMUSG0000001008024
Epn2 / Q8CHU3 / Epsin-2 / O95208*ENSMUSG0000000103624
Epn1 / Q80VP1 / Epsin-1 / Q9Y6I3*ENSMUSG0000003520321
Enthd1 / ENTH domain containing 1 / Q8IYW4*ENSMUSG0000005043916


Protein motifs (from Interpro)
Interpro ID Name
 IPR008942  ENTH/VHS
 IPR013809  ENTH domain
 IPR030544  Clathrin interactor 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0030276 clathrin binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000024661 Fth1 / P09528 / Ferritin heavy chain Ferritin heavy chain, N-terminally processed / P02794* / ferritin heavy chain 1*  / complex
 ENSMUSG00000028082 Q91X43 / Sh3d19 / SH3 domain-containing protein 19 / Q5HYK7* / SH3 domain containing 19*  / complex
 ENSMUSG00000050708 Ftl1 / FTL* / P02792* / ferritin light chain*  / complex
 ENSMUSG00000028580 Pum1 / Q80U78 / pumilio RNA-binding family member 1 / Q14671*  / complex






 

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