ENSGALG00000009835


Gallus gallus

Features
Gene ID: ENSGALG00000009835
  
Biological name :XPOT
  
Synonyms : exportin for tRNA / XPOT
  
Possible biological names infered from orthology : exportin, tRNA (nuclear export receptor for tRNAs) / O43592 / Q9CRT8
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 33607081
Gene end: 33632184
  
Corresponding Affymetrix probe sets: GgaAffx.6166.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015971
Ensembl peptide - ENSGALP00000064612
NCBI entrez gene - 417824     See in Manteia.
RefSeq - NM_001199606
RefSeq - XM_015281535
RefSeq Peptide - NP_001186535
swissprot - E1C593
swissprot - A0A1L1S0F5
Ensembl - ENSGALG00000009835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 xpotENSDARG00000099652Danio rerio
 XPOTENSG00000184575Homo sapiens
 XpotENSMUSG00000034667Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR013598  Exportin-1/Importin-beta-like
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006409 tRNA export from nucleus IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0071528 tRNA re-export from nucleus IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016363 nuclear matrix IBA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0008536 Ran GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002569 RAN / P42558 / GTP-binding nuclear protein Ran / P62826* / P62827* / Q61820* / Rasl2-9* / 1700009N14Rik* / RIKEN cDNA 1700009N14 gene* / RAS-like, family 2, locus 9* / RAN, member RAS onco...  / complex






 

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contact: otassy@igbmc.fr