ENSGALG00000009906


Gallus gallus

Features
Gene ID: ENSGALG00000009906
  
Biological name :UBR2
  
Synonyms : ubiquitin protein ligase E3 component n-recognin 2 / UBR2
  
Possible biological names infered from orthology : Q6WKZ8 / Q8IWV8
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 23025677
Gene end: 23075788
  
Corresponding Affymetrix probe sets: GgaAffx.6222.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016092
Ensembl peptide - ENSGALP00000046779
NCBI entrez gene - 421387     See in Manteia.
RefSeq - XM_419446
RefSeq - XM_004935342
swissprot - E1C1D2
swissprot - A0A1D5P284
Ensembl - ENSGALG00000009906
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubr2ENSDARG00000070164Danio rerio
 UBR2ENSG00000024048Homo sapiens
 Ubr2ENSMUSG00000023977Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
UBR1 / ubiquitin protein ligase E3 component n-recognin 1 / O70481* / Q8IWV7*ENSGALG0000000924947
UBR3* / Q5U430* / Q6ZT12* / ubiquitin protein ligase E3 component n-recognin 3* / ubiquitin protein ligase E3 component n-recognin 3 (putative)*ENSGALG0000000960810
UBR3* / Q5U430* / Q6ZT12* / ubiquitin protein ligase E3 component n-recognin 3* / ubiquitin protein ligase E3 component n-recognin 3 (putative)*ENSGALG000000356056


Protein motifs (from Interpro)
Interpro ID Name
 IPR003126  Zinc finger, UBR-type
 IPR003769  Adaptor protein ClpS, core
 IPR011991  ArsR-like helix-turn-helix domain
 IPR014719  Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006342 chromatin silencing IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0007131 reciprocal meiotic recombination IEA
 biological_processGO:0007140 male meiotic nuclear division IEA
 biological_processGO:0007141 male meiosis I IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0010529 negative regulation of transposition IEA
 biological_processGO:0030163 protein catabolic process IEA
 biological_processGO:0032007 negative regulation of TOR signaling IEA
 biological_processGO:0033522 histone H2A ubiquitination IEA
 biological_processGO:0071233 cellular response to leucine IEA
 biological_processGO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA
 molecular_functionGO:0070728 leucine binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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