ENSGALG00000010283


Gallus gallus

Features
Gene ID: ENSGALG00000010283
  
Biological name :GTF2E2
  
Synonyms : general transcription factor IIE subunit 2 / GTF2E2
  
Possible biological names infered from orthology : P29084 / Q9D902 / ral transcription factor IIE subunit 2
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 34972920
Gene end: 34998173
  
Corresponding Affymetrix probe sets: Gga.12337.1.S1_s_at (Chicken Array)   Gga.12337.3.S1_s_at (Chicken Array)   GgaAffx.12946.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043962
Ensembl peptide - ENSGALP00000061655
Ensembl peptide - ENSGALP00000061384
Ensembl peptide - ENSGALP00000048726
Ensembl peptide - ENSGALP00000047432
Ensembl peptide - ENSGALP00000046789
Ensembl peptide - ENSGALP00000016708
NCBI entrez gene - 771227     See in Manteia.
RefSeq - XM_015276331
RefSeq - NM_001012888
RefSeq - XM_001233399
RefSeq Peptide - NP_001012906
swissprot - A0A1D5NUE5
swissprot - A0A1L1RS71
swissprot - A0A1D5P294
swissprot - Q5ZIE1
swissprot - A0A1L1RRF8
swissprot - A0A1D5P426
Ensembl - ENSGALG00000010283
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf2e2ENSDARG00000012672Danio rerio
 GTF2E2ENSG00000197265Homo sapiens
 Gtf2e2ENSMUSG00000031585Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003166  Transcription factor TFIIE beta subunit, DNA-binding domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR016656  Transcription initiation factor TFIIE, beta subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0005673 transcription factor TFIIE complex IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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