ENSGALG00000010316


Gallus gallus

Features
Gene ID: ENSGALG00000010316
  
Biological name :FRAS1
  
Synonyms : FRAS1 / Fraser extracellular matrix complex subunit 1
  
Possible biological names infered from orthology : Extracellular matrix protein FRAS1 / Q80T14 / Q86XX4
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 35018318
Gene end: 35181390
  
Corresponding Affymetrix probe sets: Gga.18261.1.S1_s_at (Chicken Array)   Gga.19505.1.S1_s_at (Chicken Array)   GgaAffx.23199.1.S1_at (Chicken Array)   GgaAffx.6511.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037588
NCBI entrez gene - 422506     See in Manteia.
RefSeq - XM_015276618
RefSeq - XM_420470
swissprot - F1NX10
Ensembl - ENSGALG00000010316
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fras1ENSDARG00000054619Danio rerio
 FRAS1ENSG00000138759Homo sapiens
 Fras1ENSMUSG00000034687Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FREM2 / FRAS1 related extracellular matrix protein 2 / Q5SZK8* / Q6NVD0*ENSGALG0000003367120
FREM1 / FRAS1 related extracellular matrix 1 / Q5H8C1* / Q684R7* / FRAS1-related extracellular matrix protein 1 *ENSGALG0000000542612
CSPG4 / chondroitin sulfate proteoglycan 4 / Q6UVK1* / Q8VHY0*ENSGALG0000000267810
BC067074* / cDNA sequence BC067074*ENSGALG0000002056110


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001007  VWFC domain
 IPR003644  Na-Ca exchanger/integrin-beta4
 IPR006212  Furin-like repeat
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR032822  Extracellular matrix protein FRAS1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002009 morphogenesis of an epithelium IEA
 biological_processGO:0003338 metanephros morphogenesis IEA
 biological_processGO:0007154 cell communication IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0043588 skin development IEA
 biological_processGO:0060021 roof of mouth development IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031012 extracellular matrix IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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