ENSGALG00000010536


Gallus gallus

Features
Gene ID: ENSGALG00000010536
  
Biological name :FAF1
  
Synonyms : FAF1 / Fas associated factor 1
  
Possible biological names infered from orthology : P54731 / Q9UNN5
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 23881402
Gene end: 24021230
  
Corresponding Affymetrix probe sets: Gga.13165.1.S1_at (Chicken Array)   Gga.19902.1.S1_at (Chicken Array)   GgaAffx.23249.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017131
Ensembl peptide - ENSGALP00000045346
NCBI entrez gene - 424629     See in Manteia.
RefSeq - XM_015291225
swissprot - A0A1D5NY89
swissprot - F1NLG1
Ensembl - ENSGALG00000010536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 faf1ENSDARG00000022418Danio rerio
 FAF1ENSG00000185104Homo sapiens
 Faf1ENSMUSG00000010517Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FAF2 / Fas associated factor family member 2 / Q3TDN2* / Q96CS3* / FAS-associated factor 2 *ENSGALG0000000333120


Protein motifs (from Interpro)
Interpro ID Name
 IPR001012  UBX domain
 IPR006577  UAS
 IPR012336  Thioredoxin-like fold
 IPR029071  Ubiquitin-like domain superfamily
 IPR033043  FAS-associated factor 1, UBX domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007253 cytoplasmic sequestering of NF-kappaB IEA
 biological_processGO:0008219 cell death IEA
 biological_processGO:0010942 positive regulation of cell death IEA
 biological_processGO:0030155 regulation of cell adhesion IEA
 biological_processGO:0031334 positive regulation of protein complex assembly IEA
 biological_processGO:0042176 regulation of protein catabolic process IEA
 biological_processGO:1902043 positive regulation of extrinsic apoptotic signaling pathway via death domain receptors IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0034098 VCP-NPL4-UFD1 AAA ATPase complex IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0031072 heat shock protein binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0043130 ubiquitin binding IEA
 molecular_functionGO:0051059 NF-kappaB binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr