ENSGALG00000010652


Gallus gallus

Features
Gene ID: ENSGALG00000010652
  
Biological name :SCP2
  
Synonyms : non-specific lipid-transfer protein / SCP2
  
Possible biological names infered from orthology : P22307 / P32020 / sterol carrier protein 2 / sterol carrier protein 2, liver
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 24613255
Gene end: 24625386
  
Corresponding Affymetrix probe sets: Gga.17998.1.A1_at (Chicken Array)   Gga.3425.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061303
Ensembl peptide - ENSGALP00000017306
NCBI entrez gene - 396550     See in Manteia.
RefSeq - XM_015290973
RefSeq - NM_001305200
RefSeq Peptide - NP_001292129
swissprot - A0A1L1RR82
swissprot - F1NSS4
Ensembl - ENSGALG00000010652
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scp2aENSDARG00000012194Danio rerio
 SCP2ENSG00000116171Homo sapiens
 Scp2ENSMUSG00000028603Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HSD17B4 / hydroxysteroid 17-beta dehydrogenase 4 / P51659* / P51660*ENSGALG0000000218720


Protein motifs (from Interpro)
Interpro ID Name
 IPR003033  SCP2 sterol-binding domain
 IPR016039  Thiolase-like
 IPR020613  Thiolase, conserved site
 IPR020615  Thiolase, acyl-enzyme intermediate active site
 IPR020616  Thiolase, N-terminal
 IPR020617  Thiolase, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007031 peroxisome organization IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0032385 positive regulation of intracellular cholesterol transport IEA
 biological_processGO:1901373 lipid hydroperoxide transport IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0000062 fatty-acyl-CoA binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0015485 cholesterol binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA
 molecular_functionGO:0036042 long-chain fatty acyl-CoA binding IEA
 molecular_functionGO:0070538 oleic acid binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
alpha-linolenic acid (ALA) metabolism
Beta-oxidation of pristanoyl-CoA
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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