ENSGALG00000010766


Gallus gallus

Features
Gene ID: ENSGALG00000010766
  
Biological name :ATXN3
  
Synonyms : Ataxin-3 / ATXN3 / Q9W689
  
Possible biological names infered from orthology : ataxin 3 like / ATXN3L / P54252 / Q9CVD2 / Q9H3M9
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 44616495
Gene end: 44628129
  
Corresponding Affymetrix probe sets: Gga.12408.1.S2_at (Chicken Array)   Gga.12408.2.S1_at (Chicken Array)   Gga.12408.3.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017488
NCBI entrez gene - 378424     See in Manteia.
RefSeq - XM_015287269
RefSeq - NM_204357
RefSeq - XM_015287267
RefSeq - XM_015287268
RefSeq Peptide - NP_989688
swissprot - Q9W689
Ensembl - ENSGALG00000010766
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atxn3ENSDARG00000099274Danio rerio
 ATXN3ENSG00000066427Homo sapiens
 ATXN3LENSG00000123594Homo sapiens
 Atxn3ENSMUSG00000021189Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003903  Ubiquitin interacting motif
 IPR006155  Josephin domain
 IPR033865  Machado-Joseph disease protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEA
 biological_processGO:0010810 regulation of cell-substrate adhesion IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0034605 cellular response to heat IEA
 biological_processGO:0035520 monoubiquitinated protein deubiquitination IEA
 biological_processGO:0035640 exploration behavior IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0071218 cellular response to misfolded protein IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA
 cellular_componentGO:0042405 nuclear inclusion body IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity ISS
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity ISS


Pathways (from Reactome)
Pathway description
Josephin domain DUBs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000011562 PRKN / parkin RBR E3 ubiquitin protein ligase / Park2* / O60260* / Q9WVS6* / E3 ubiquitin-protein ligase parkin *  / reaction / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr