ENSGALG00000011296


Gallus gallus

Features
Gene ID: ENSGALG00000011296
  
Biological name :FRMD1
  
Synonyms : FERM domain containing 1 / FRMD1
  
Possible biological names infered from orthology : Q8N878
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 42160885
Gene end: 42186326
  
Corresponding Affymetrix probe sets: Gga.18068.1.S1_s_at (Chicken Array)   GgaAffx.7180.1.S1_at (Chicken Array)   GgaAffx.7180.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018405
NCBI entrez gene - 421562     See in Manteia.
RefSeq - XM_015284361
RefSeq - XM_419603
RefSeq - XM_015284362
RefSeq - XM_015284363
swissprot - E1BZ28
Ensembl - ENSGALG00000011296
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-205h11.1ENSDARG00000096757Danio rerio
 zgc:172136ENSDARG00000078741Danio rerio
 FRMD1ENSG00000153303Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FRMD6 / FERM domain containing 6 / Q8C0V9* / Q96NE9* / FERM domain-containing protein 6 *ENSGALG0000001237452
PTPN14 / protein tyrosine phosphatase, non-receptor type 14 / Q15678* / Q62130* / Tyrosine-protein phosphatase non-receptor type 14 *ENSGALG0000000978417
PTPN21 / protein tyrosine phosphatase, non-receptor type 21 / Q16825*ENSGALG0000001061615
FRMPD2 / FERM and PDZ domain containing 2 / Q68DX3*ENSGALG0000000609514
PTPN13 / protein tyrosine phosphatase, non-receptor type 13 / Q12923*ENSGALG000000110789
ENSGALG000000445530


Protein motifs (from Interpro)
Interpro ID Name
 IPR000299  FERM domain
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR018979  FERM, N-terminal
 IPR018980  FERM, C-terminal PH-like domain
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031032 actomyosin structure organization IBA
 cellular_componentGO:0005856 cytoskeleton IBA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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