ENSGALG00000012374


Gallus gallus

Features
Gene ID: ENSGALG00000012374
  
Biological name :FRMD6
  
Synonyms : FERM domain containing 6 / FRMD6
  
Possible biological names infered from orthology : FERM domain-containing protein 6 / Q8C0V9 / Q96NE9
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 58190951
Gene end: 58203141
  
Corresponding Affymetrix probe sets: Gga.13656.1.S1_at (Chicken Array)   GgaAffx.7832.1.S1_at (Chicken Array)   GgaAffx.7832.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020178
NCBI entrez gene - 428930     See in Manteia.
RefSeq - XM_004936517
RefSeq - XM_004936518
RefSeq - XM_015276767
swissprot - E1C3P9
Ensembl - ENSGALG00000012374
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 frmd6ENSDARG00000002332Danio rerio
 FRMD6ENSG00000139926Homo sapiens
 Frmd6ENSMUSG00000048285Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FRMD1 / FERM domain containing 1 / Q8N878*ENSGALG0000001129652
PTPN21 / protein tyrosine phosphatase, non-receptor type 21 / Q16825*ENSGALG0000001061616
PTPN14 / protein tyrosine phosphatase, non-receptor type 14 / Q15678* / Q62130* / Tyrosine-protein phosphatase non-receptor type 14 *ENSGALG0000000978415
FRMPD2 / FERM and PDZ domain containing 2 / Q68DX3*ENSGALG0000000609512
PTPN13 / protein tyrosine phosphatase, non-receptor type 13 / Q12923*ENSGALG0000001107811
ENSGALG000000445530


Protein motifs (from Interpro)
Interpro ID Name
 IPR000299  FERM domain
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR018979  FERM, N-terminal
 IPR018980  FERM, C-terminal PH-like domain
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003383 apical constriction IEA
 biological_processGO:0031032 actomyosin structure organization IBA
 biological_processGO:0032970 regulation of actin filament-based process IEA
 biological_processGO:0034613 cellular protein localization IEA
 cellular_componentGO:0005856 cytoskeleton IBA
 cellular_componentGO:0043296 apical junction complex IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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