ENSDARG00000002332


Danio rerio

Features
Gene ID: ENSDARG00000002332
  
Biological name :frmd6
  
Synonyms : FERM domain containing 6 / frmd6
  
Possible biological names infered from orthology : FERM domain-containing protein 6 / Q8C0V9 / Q96NE9
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 36958086
Gene end: 36997761
  
Corresponding Affymetrix probe sets: Dr.3946.1.A1_at (Zebrafish Array)   Dr.3946.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000024425
Ensembl peptide - ENSDARP00000120929
Ensembl peptide - ENSDARP00000118027
NCBI entrez gene - 321937     See in Manteia.
RefSeq - NM_001020816
RefSeq Peptide - NP_001018652
swissprot - B8JJL6
swissprot - B8JJL5
ZFIN ID - ZDB-GENE-050522-354
Ensembl - ENSDARG00000002332
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FRMD6ENSGALG00000012374Gallus gallus
 FRMD6ENSG00000139926Homo sapiens
 Frmd6ENSMUSG00000048285Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:172136 / FRMD1* / Q8N878* / FERM domain containing 1*ENSDARG0000007874139
si:ch73-205h11.1 / FRMD1* / Q8N878* / FERM domain containing 1*ENSDARG0000009675724
ptpn13 / protein tyrosine phosphatase, non-receptor type 13 / Q12923*ENSDARG0000010369917
ptpn21 / protein tyrosine phosphatase, non-receptor type 21 / Q16825*ENSDARG0000006224817
frmpd2 / FERM and PDZ domain containing 2 / Q68DX3*ENSDARG0000007411914
ptpn20 / protein tyrosine phosphatase, non-receptor type 20ENSDARG000000754594
CR931802.3ENSDARG000001062450


Protein motifs (from Interpro)
Interpro ID Name
 IPR000299  FERM domain
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR018979  FERM, N-terminal
 IPR018980  FERM, C-terminal PH-like domain
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031032 actomyosin structure organization IBA
 cellular_componentGO:0005856 cytoskeleton IBA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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