ENSMUSG00000048285


Mus musculus

Features
Gene ID: ENSMUSG00000048285
  
Biological name :Frmd6
  
Synonyms : FERM domain-containing protein 6 / Frmd6 / Q8C0V9
  
Possible biological names infered from orthology : FERM domain containing 6 / Q96NE9
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: C2
Gene start: 70825514
Gene end: 70902234
  
Corresponding Affymetrix probe sets: 10396170 (MoGene1.0st)   1451264_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000052202
NCBI entrez gene - 319710     See in Manteia.
MGI - MGI:2442579
RefSeq - XM_006515979
RefSeq - NM_028127
RefSeq - XM_006515977
RefSeq - XM_006515978
RefSeq Peptide - NP_082403
swissprot - Q8C0V9
Ensembl - ENSMUSG00000048285
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 frmd6ENSDARG00000002332Danio rerio
 FRMD6ENSGALG00000012374Gallus gallus
 FRMD6ENSG00000139926Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ptpn13 / protein tyrosine phosphatase, non-receptor type 13 / Q12923*ENSMUSG0000003457324
Ptpn21 / protein tyrosine phosphatase, non-receptor type 21 / Q16825*ENSMUSG0000002100917
Ptpn14 / Q62130 / Tyrosine-protein phosphatase non-receptor type 14 / Q15678* / protein tyrosine phosphatase, non-receptor type 14*ENSMUSG0000002660416
Frmpd2 / FERM and PDZ domain containing 2 / Q68DX3*ENSMUSG0000010884116


Protein motifs (from Interpro)
Interpro ID Name
 IPR000299  FERM domain
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR018979  FERM, N-terminal
 IPR018980  FERM, C-terminal PH-like domain
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain
 IPR029071  Ubiquitin-like domain superfamily
 IPR035963  FERM superfamily, second domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003383 apical constriction IGI
 biological_processGO:0031032 actomyosin structure organization IBA
 biological_processGO:0032970 regulation of actin filament-based process IGI
 biological_processGO:0034613 cellular protein localization IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043296 apical junction complex IDA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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