ENSGALG00000011078


Gallus gallus

Features
Gene ID: ENSGALG00000011078
  
Biological name :PTPN13
  
Synonyms : protein tyrosine phosphatase, non-receptor type 13 / PTPN13
  
Possible biological names infered from orthology : Q12923
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 46127455
Gene end: 46159442
  
Corresponding Affymetrix probe sets: Gga.12818.1.S1_at (Chicken Array)   GgaAffx.23445.1.S1_s_at (Chicken Array)   GgaAffx.7019.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018028
NCBI entrez gene - 422591     See in Manteia.
RefSeq - XM_015276498
RefSeq - XM_015276499
RefSeq - XM_015276500
RefSeq - XM_015276501
RefSeq - XM_015276502
RefSeq - XM_015276503
RefSeq - XM_015276497
swissprot - E1C8H6
Ensembl - ENSGALG00000011078
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptpn13ENSDARG00000103699Danio rerio
 PTPN13ENSG00000163629Homo sapiens
 Ptpn13ENSMUSG00000034573Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTPN21 / protein tyrosine phosphatase, non-receptor type 21 / Q16825*ENSGALG0000001061612
PTPN14 / protein tyrosine phosphatase, non-receptor type 14 / Q15678* / Q62130* / Tyrosine-protein phosphatase non-receptor type 14 *ENSGALG0000000978411
FRMD6 / FERM domain containing 6 / Q8C0V9* / Q96NE9* / FERM domain-containing protein 6 *ENSGALG000000123744
FRMD1 / FERM domain containing 1 / Q8N878*ENSGALG000000112963
ENSGALG000000445531
FRMPD2 / FERM and PDZ domain containing 2 / Q68DX3*ENSGALG000000060950


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR001478  PDZ domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR012153  Tyrosine-protein phosphatase non-receptor type 13
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0014066 regulation of phosphatidylinositol 3-kinase signaling IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA
 molecular_functionGO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of PIPs at the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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